Salvelinus namaycush (lake trout): 120019866
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Entry
120019866 CDS
T07522
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7-like
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120019866
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120019866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
120019866
NCBI-ProteinID:
XP_038819208
UniProt:
A0A8U0P5W3
LinkDB
All DBs
Position
Sna25:28205294..28301963
Genome browser
AA seq
3122 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPVGQQEHQDYGSLSSNSLHHPSQAV
PGKPKMGHPYDPFAGYEQQQDNGPAVNSMVTPHSRYHNSPQQPGRGHHVYPRAQGDGHGQ
SFPDGGAAWGPQTGPGQGRPPFQQQQASAQAPSHQQHGPSGPQAPSHQQHDPSGPQDHGH
RMGPYMGRSDYATMQGHPGQTQTPPRINHFPPGMGQEPNHYMAHVGLQQNSSMTGHPAQQ
QQFLHQPGQGPVHTQDRMASHTSHQQHQGLAGRPHQNMGFNMHGQAASPGAVTSSGPYPP
YPQYSNHNQGLAGSAGMSPGMSLSSTSNNNSSASGPMGPAQVQCYPNAGGAPQRYPGPQV
HQQPVHPNQITSQPMHPSQAQATPHKQPHLPTPPHGSYGSPTSMSPMKGMGTTAVTPPPQ
QVRPPSAGLAPEVGLYPGVPLQAPNPMAPPQRNTTPLGVQQPQHHPQHLSHPQQHPHMPP
SQQLYPGMSPNQRGPLDQVRPPGPMAHGEPPGPQDQRLLPPQQQAPKSGLQPPPVAFQQQ
VHPAQTAFPSSQAQTHLAGPHHQSSPPNQPPWAPAGHQSPPTPQKVPHIQYSTSSEMTAS
DRTPASGANLQPANRVKKPTEQKPKKKKAKVMVEERVEGKKKPKKKKGGCIEECGEEGKR
KVGDGPWAEVNCLTGALEESLVVKTKKKPKEPKEPKTPKEPKEKAKSTTPKAKMPKKPRS
TKKVESAEGSGSSVKETKRKREPSVSSDVEKSPPGPSDEDDDDDSVQVRAHMESGEKMEV
EEFYVKFKSFSYLHCRWADLEELEKDKRIHQKVKRFRAKQALPTFVTEMDDEPFNPDYVE
VDRVLDVSESTDENGEPVKLYLVKWCSLPYEDITWELKADIDQAKIDEYEAVAARQPETK
RVERPPTENWQKSESSRDYINDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS
ITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAYEMNY
RDVQGRVIKGAYKFHAVITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKM
MDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQAILK
PMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGGAWGG
GGAQVPNLLNTMMELRKCCNHPYLINGAEEKILDDFRENHHAEMPQFHLQAMIQAAGKLV
LIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFS
RPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYR
LITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVPQLSKKEVEDLLRKGAYGALM
DEEDEGSKFCEEDIDQILLRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQK
WAKKAELDMEAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPLTKPR
RPQDRAHGYPRSECFRVEKNLLVYGWGRWGDILSRGRFKRPLQEQDVETICRALLAYCLL
HYRGDENIKRFIWDLITPSEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQLPRAK
WLASCNPDLLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDHADRILEGTDSSEMDI
WIPQPFHAEVPADWWDSKADKSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAA
EQRGADMMADGPEGEDEDPEYKPLRMTFKDEMEDFANSPLDDKEETVDVESGESKPGENV
AGSRGAGRLYWPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRQPREHLFSM
VTDGGGAYVQEDGAFMAEGSPYMAKGAAFMPETTGLLAEGGAAFKERRQRWTRREESDFY
RVVSTFGVIYDTDRQRFDWTQFRAFARLDKKSDESLEKYYFSFVAMCKRVCRMQVKANTE
LPDPTLIIDPITEERASRTLYRIELLRRIREQVLPNPLLGERLRLCQPSSDLPEWWDCGR
HDHDLLLGASKHGVSRTDYHILNDPALGFLEAHRKFTKGGSAGVPQPPRDGALSTASSSS
NEQATATAGAEKSLPVQEDEEGKEMKEEGNDIPCTKPEKPDEGKEEEMEAKKEEKAGSPV
KVKEEEKAGSPKKVKEEEKAGSSKKVKEEEKAGSPKKVKEEEKAGSPKKMKEEEKGEEED
KEEKMEVNGDADGETSKEAKPEKEYKAPTETKDQDKKLDFQEKPESPKASEEQGTKKEER
DEKEGSPAKSPKPVAEKGPDEEKMEEDDKSEKSSQAEAGATSEQKNFDEESNASLSTTAR
DETRDGFCPEDGEPSAIPALQERTTSSFWPKDRVMINRMDNICDAVIKGKWPANRRQFFD
FPGLLPGYPGPMTSESPMPRQSLAELSMAAAAQTSFSGSEDLTLSPQANEDALSISLPKQ
RRRRRRKVEIEAERAAKRRNLMDMVAQLRESHAAESQSQAMDLTKGILHQHHKSSAPSPA
SYSSSMVSPAALKAQMELLQPATPSRHRANCSLAEADLPTRRRRGRRKNVEGLELLFMRG
ATEDSERTKASVEGLQMPPRSHRHNIPSTSACVPSVSAMEDREAGTPSNKDLSDWLRQHP
TYTMDMPTAYTPKSEEMLLSSQFPKPKQKRHRCRNPNKIDINTLTGEEKVPVINRRNGRK
MGGAMAPPMKDLPRWLLENSDFAVAPDWTDIVKQSGFLPEAMFDRLLTGPLVREEGVRRR
GRRPKSEIAKAAAAQAASSGGLNPLLINGLFGGMDLTSLQGLQSLQSLQLQLMGFPGMGG
ADAKHASAMLPLMLPGMAGMGGLPNMFGLGGLFASNLAAATPAAASNGTNDEGDSDETSK
RDAREGGQEQDEEKDDTGEEAESSKANGEAAALNVAAAAMAASGMSATSLAFNPFLLSTM
APGLFSPYMFLPPGLGGLTLPGFPPTALADLQSAMAGAMGVASGAQGQEKEPGQVALDRP
AAATADPETADDSDSAESLEKTAESSALEDEASALAEEADSPEDLEAEEEGEDALKEEEK
SD
NT seq
9369 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccggggatgttgagcctgttcggggatgatgccaacctgttctcggacggg
ctggagggcctgggggactgtggcttcccccagggccagcccaaccccgtaggacagcag
gagcaccaggactacgggtcgctctcctccaactcactacaccacccctcgcaggccgtc
cccggaaagcccaagatgggtcacccctacgacccctttgcaggctacgagcagcagcag
gacaacggccccgccgtcaacagcatggtgaccccgcactcacgctaccacaacagcccc
caacaacccggaagggggcaccatgtctaccccagagcccaaggcgatgggcacgggcag
tccttccctgacggaggagccgcgtggggcccccagactggccccgggcagggcaggcct
ccattccagcagcaacaggcatccgcccaggccccatcccaccagcagcacggcccctct
gggccccaggccccatcccaccagcagcacgacccctcagggccccaggaccacggccac
cgtatgggcccctacatgggccggtccgactacgccactatgcagggccaccctggccag
acccagacgccacccaggatcaaccacttccctccgggcatgggccaggagcccaaccac
tacatggcccacgtggggctccagcagaactccagcatgacgggccacccggcacagcaa
cagcagtttcttcaccagcccggccagggccctgttcacacccaggaccgtatggcctcc
cacacctctcaccagcagcaccagggcttggccgggaggccacaccagaacatggggttc
aacatgcacggccaggcagcctctcctggtgctgtaaccagctcagggccgtaccccccc
tacccccagtacagcaaccataatcagggattagccggcagtgcagggatgagtcccggc
atgagcctcagcagcaccagtaacaacaacagtagcgccagcgggccaatggggccagca
caagtccagtgttaccccaacgcagggggggccccacagcgctacccgggtcctcaggta
caccagcagcctgtccaccccaaccaaatcaccagccagcccatgcacccctcccaggcc
caggccaccccccataagcagccccacctccccacaccacctcatggatcttacggctct
cccacctccatgtcccccatgaagggcatgggaaccaccgcggtcacacctccgcctcaa
caggtccgaccccctagtgcaggtcttgctcccgaggtagggttgtaccccggagtgcca
ctccaggcccctaaccccatggccccccctcagagaaacaccactcccctgggcgtgcag
caaccgcaacatcatccccagcacctctcccacccacagcagcacccccacatgcccccg
agccagcagctctacccgggtatgtcccccaaccagagaggccctctcgaccaggtgaga
cctccaggtcctatggcccacggtgagcctccaggaccacaggaccagcggctgctccct
ccccagcaacaggctcccaaatctgggctgcagcctcctcccgtggccttccagcagcag
gtgcacccagcccagaccgcttttccctcgtcacaggctcagacacatctggccggcccc
caccaccagagctccccgcccaaccagccaccttgggcgccggcaggacaccagtcgcct
ccaaccccccagaaagtgcctcacattcagtattctacgtcatctgagatgacagcttct
gacaggacacccgcttcgggggcaaacctccagccagccaaccgtgtcaagaagcccact
gagcagaaaccaaaaaagaagaaagcaaaggtgatggtggaggaaagagtagaggggaaa
aagaaaccaaaaaagaagaaaggaggatgtatagaggaatgtggcgaggaggggaaacga
aaggtcggggacggtccctgggcggaggttaactgtctgacaggtgccctggaggaatcg
cttgtggtgaagacaaagaagaaaccgaaggagcctaaagagcccaagactcccaaagag
cccaaggagaaggccaagagcactacccccaaggccaagatgcccaagaagcccagaagc
actaagaaggtggagtcagcggagggcagtggcagcagtgtgaaggagactaagaggaag
agggagccctcggtcagctccgatgtggagaagtcacccccaggcccctctgatgaggac
gacgacgacgacagtgtccaggtacgcgcacacatggaatcgggagagaaaatggaagtg
gaagaattctatgtgaaattcaagagcttctcctacctgcactgtcgctgggcagatctg
gaggagctggagaaggacaaaaggatccaccagaaggtcaagcggttcagggccaagcag
gccctccccaccttcgtgacagagatggatgacgagcctttcaacccagactacgttgag
gtggaccgggtactggacgtgtcagagagcacagatgagaacggagagcctgtaaagctg
tacctggtgaagtggtgttccctgccctatgaggatataacttgggagctgaaggccgac
atcgaccaggccaagatcgatgagtacgaggccgtggcggcccgtcagcccgagaccaaa
cgcgtggagcgacctcccaccgaaaactggcagaaatccgagagttccagggattatata
aacgacaacgcactcagggaataccagctggagggagtgaactggttgctcttcaactgg
tacaatacacggaactgcatcctagcagatgaaatgggcctgggcaagaccatccagtcc
atcacattcctctatgagatctacctgaaggggatccacgggcccttcctggtcatcgcc
cccctctccaccattccaaactgggagcgggagttccgcacgtggaccgagctcaacgtg
atcgtctaccacggcagccaggccagccgcaagaccatccaggcctacgaaatgaactac
cgcgacgtgcagggtcgtgtgataaagggagcgtacaaattccatgcggtcatcaccaca
tttgagatgattctgacagactgtccggagctgcgcagcgtcccgtggcgctgtgtggtc
atcgacgaggctcaccgcctcaagaacaggaactgcaaactgctggagggtctcaagatg
atggacatggagcacaaggtgctgctgaccgggacgcccctgcagaacacggtggaggag
ctcttcagtctgctcaacttcctggaaccggaacgcttcccctcggagaacaccttcatg
caggagtttggagacctcaagactgaagagcaggtccagaagctgcaggccatcctgaag
cccatgatgctgcgacgtctcaaggaggacgtggagaagaacctggctcccaaggaggag
accatcattgaggtggagctgaccaacatccagaagaagtactacagggccatcctggag
aagaacttctccttcctgtctaaaggaggaccgggaggaggaggtggtgcatggggaggc
ggaggtgcacaggtccccaacctgctcaacaccatgatggagctgaggaagtgctgcaac
cacccctacctcatcaatggtgcagaggagaagatcctggacgacttccgtgagaaccac
catgccgagatgccccaattccacctacaggccatgatccaggcagcaggcaagctggtg
ctgatcgacaagctgctgcccaagctgaaggccgggggacacagggtcctcgtcttctcc
cagatggtgcgctgcctggacatcctggaggactacctcatccagaaacggtacccgtat
gagcgtatcgatggccgtgtgaggggtaacctccggcaggctgcgattgaccgcttctct
cgtccggactctgaccgctttgtcttccttctgtgtacccgggctggaggcctgggcatc
aacctgaccgctgccgacacctgcatcatctttgactcggattggaacccccagaatgac
ttacaggcgcaagccagatgccacaggattggccagagcaaggcagtgaagatctacagg
ctgatcaccaggaactcctatgagagggagatgtttgacaaggccagcctcaagctgggc
ctcgacaaggctgtgctgcagtccatgagtggccgagaaaacgcagccaacggggttcca
cagctgtctaagaaggaggtggaggacctcctccgtaaaggagcctacggagctctgatg
gacgaggaggacgagggctcgaagttctgcgaagaggacattgaccagatcctcctgaga
cgaacccagaccatcaccattgagtccgagggcaaggggtccaccttcgccaaggcgagt
tttgtggctgctgggaacaggacggacatttccctggaggacccggacttctggcagaag
tgggccaagaaggcagagctcgacatggaagccatcaatggacgaaacacccttgtgatt
gacactccgagggtgcggaagcagacacgccactacagctcgatgaaggaggacgaattg
gccgagttctccgagctggaaagtgacggcgagaacgagaagcccttgaccaaacccagg
cggccccaggaccgagctcacgggtacccccgcagcgagtgcttcagggtggagaagaac
ctgctggtttatgggtggggtcgctggggagacatcctgtcccgcgggcgtttcaagcgg
cccctgcaggagcaagacgtggagaccatctgccgcgccctgctggcctactgcctgctg
cactaccgtggcgacgagaacatcaagcgcttcatctgggacctcatcacgccctctgag
gacggacagagccgcacactcaccaaccactccggtctgtctactccagtaccgcggggt
cgtaaggggaagaaggggaaaccagccccgcctgcccctccccagctccccagggcaaag
tggctggccagctgtaaccctgacctgctactgcaggaggacagctacaagagacacctc
aaacaccactgtaacaaagttctactgagggtccgtatgctctactatctgcgacaggaa
gtcatcggtgaccacgcagacaggatcctagagggaacagactcaagtgaaatggatatc
tggatcccgcagcctttccacgccgaggtgcccgccgattggtgggacagcaaggcagac
aaatcgctgctcatcggtgtcttcaaacacggctatgagaagtataactcgatgcgtgcc
gaccctgcgctgtgtttcttggagcgggtgggcatgcccgacgccaaggccatcgctgca
gagcagaggggggcggacatgatggcagatggtccggagggagaggatgaagacccagag
tacaagcctctccgcatgacctttaaagatgagatggaggacttcgcgaactcacccctg
gatgacaaagaggagactgtggacgttgagagtggtgaatctaaaccaggtgagaatgta
gcaggcagcagaggggcgggtcgtctgtactggccggcggcctcggccctcaccgctaga
ctccgccgcctcatcacggcctaccagcgcacgcacaagagggagcagctccgccaggaa
gccatggcccggcccgacggacgccgccgccgccagccccgagaacatctcttctccatg
gtcacagacggaggaggggcctacgtgcaggaggacggagcattcatggcagagggaagt
ccttatatggccaagggcgccgcttttatgcctgagacgacggggctcctggcggaagga
ggggccgccttcaaagagaggcgtcagaggtggaccaggcgtgaggaatcagacttctac
cgggttgtgtccacgtttggtgtgatctatgacacggaccgccagcgctttgactggacc
cagttcagggccttcgcccggctggacaagaagagtgacgagagcctggagaaatactac
ttctccttcgtggccatgtgcaagcgggtgtgtcgcatgcaggtcaaggccaacacagag
ctcccagaccctaccctgatcattgaccccatcacggaggagcgcgcctcacgcaccctc
taccgcattgagctgctgcgtcgcattcgcgagcaggtgctgcccaaccccctgctaggt
gagcgcctgcgcctctgccagcctagctccgacctgcccgagtggtgggactgcggccgg
cacgaccacgacctcctcctgggcgcctccaagcacggcgtgagccgcactgactaccac
atcctcaacgaccctgcgctgggcttcctggaggcccacaggaagttcaccaagggggga
tcggctggggtgcctcagccgccccgcgatggagctctctctactgcttcttcctcttcc
aatgagcaggccacagctactgctggtgctgagaaatccttacctgtccaagaggacgaa
gaagggaaggagatgaaagaggaaggtaacgacattccatgtactaaacctgagaaacca
gacgaaggcaaggaagaagagatggaggcgaagaaggaagagaaggccgggtctcccgtg
aaggtgaaggaggaagagaaggccgggtctcccaagaaggtgaaggaagaagagaaggcc
gggtcttccaagaaggtgaaggaggaagagaaggccgggtctcccaagaaggtgaaggag
gaagagaaggccgggtctcccaagaagatgaaggaggaagagaagggagaggaggaagac
aaagaggagaaaatggaggtcaacggcgacgctgacggagagacttccaaggaggccaaa
cccgagaaagagtacaaagctcccactgagaccaaggaccaggacaaaaagctggacttc
caggagaaaccagagtctcctaaagcatcagaagagcagggaaccaagaaagaagagaga
gatgagaaagaaggaagccctgccaagtctcctaaaccagtggctgagaaagggcccgat
gaggagaagatggaggaagacgacaagtctgagaagtcctctcaagctgaagcgggcgcc
acctcagagcagaagaactttgacgaggagagcaacgcctcactgagcaccacggccaga
gacgagacccgcgacgggttctgccccgaggacggagagccctctgccatcccggccctc
caggagagaaccacctcatccttctggcccaaggaccgtgtcatgatcaatcgcatggac
aacatctgcgatgcggtcatcaagggcaagtggcccgccaaccgacgccagttcttcgac
ttcccgggcctgttgcctggataccccggccccatgacgtctgaaagccccatgccgagg
cagagcctggccgaactgtcgatggcagcggccgctcagaccagcttcagtggcagcgag
gacctcaccctctcgccccaggctaatgaggatgctctgagcatatcattgccgaagcag
cgtcgtcgcaggcggaggaaggtggagatagaggcagagcgtgcggccaagcgcaggaac
ctgatggatatggtggcccagctcagagagtctcacgctgcagagtcccagagccaggcc
atggatcttaccaagggtattctgcaccagcaccacaagtcttcagcgccctccccggcg
agctactccagcagcatggtctcacctgctgccctcaaggcacagatggagcttctgcag
ccggccacaccctccagacacagggccaactgctcattggctgaggctgacctgcccacc
aggaggaggcggggccgcaggaaaaatgtggaggggctggagctgctgttcatgagagga
gccacggaggattcagagaggaccaaagcttcagtggaggggttgcagatgcccccacgt
tcccaccgccacaacattcccagcacctccgcctgtgtcccctctgtcagcgctatggag
gacagggaggctggtaccccctctaacaaagacctgagtgactggctcagacagcacccc
acatacaccatggacatgcctactgcgtacacaccaaagagtgaggagatgctcctctcc
tcccagttccccaaacccaagcaaaagagacaccgctgccggaaccccaacaagatcgac
atcaacacgctcaccggagaagagaaggttcccgtgatcaaccggagaaacggaagaaag
atgggtggtgccatggcccctcccatgaaggatcttcccagatggctcctggagaactca
gattttgccgtcgctccagactggactgacattgtcaagcaatcgggcttcctccctgag
gccatgttcgaccgtctcctgactggacccttggtgcgtgaggagggtgtccgtcgtcgg
ggaagacgtcccaaatcggagatcgccaaggcagcagcggcccaggctgcatcctctggg
ggccttaaccccctgctgataaacggcctgtttggaggcatggacctcaccagcttgcag
ggcctacagagcctccagagtctgcagctgcagctcatgggcttccccggcatggggggg
gctgatgctaaacacgcctcggccatgctgcctctcatgctgcctggcatggctggtatg
ggcggtctgcccaacatgtttggcctgggaggcctgttcgcaagcaacctggctgcagcc
acgcctgctgcagcctccaacggcaccaacgacgagggcgattcggacgagacatcgaag
agagacgccagggagggtggacaagagcaggatgaggagaaggacgacactggggaggag
gcagagtcgagcaaggctaatggggaggccgcggctctgaatgtggctgctgccgctatg
gccgcctccggcatgtcagctacctcactggccttcaatcccttcctgctctccaccatg
gccccggggctcttttccccctacatgttcctgccccctggcctgggaggtctcaccctg
cctggcttcccccccactgccctggccgacctgcagagtgccatggctggagccatgggg
gttgcctctggagctcagggccaggagaaggagcccggccaggttgccctggatcgccct
gctgccgctaccgcagacccagagactgctgatgacagtgactcagctgagagcctggag
aagactgcagagtcgtctgcgctagaagatgaggcctcagcattagcagaggaagccgac
tcaccggaagacctggaggccgaggaggaaggagaggatgcccttaaggaggaagagaag
agtgactga
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integrated database retrieval system