Salvelinus namaycush (lake trout): 120019903
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Entry
120019903 CDS
T07522
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00310
Lysine degradation
snh00514
Other types of O-glycan biosynthesis
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120019903
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120019903
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120019903
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120019903
Glycosyltransferases [BR:
snh01003
]
O-Glycan biosynthesis
O-linked Gal type
120019903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
120019903
NCBI-ProteinID:
XP_038819241
UniProt:
A0A8U0TKR7
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Position
Sna25:33383214..33391745
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AA seq
528 aa
AA seq
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MLQEWIRGVQSQYHSVKWTPMEEPSSHVGELGPKHWPNSRFTHVMKLKQAALKSARALWA
DYILFVDTDNLLTNRRVLTEMIAENLTVVAPMLESRVLYSNFWCGVTPQGYYKRTPEYIP
IRNWKRQGCFAVPMVHSTFLVDLRRSATRALAFHPPHHDYTFPLDDIMVFAFSARRADVQ
MYICNREHYGYLPLPLKQEQSLEEEVESFSHTMTEALIDYLMKPSKYMHHTAKPLEKMGF
DEIFLINLKRRIDRRDRMLSTLAVLGIDITLTEAVDGKALNSSQLQAMGIDMLPGYKDPY
SGRVLTRGEIGCFLSHYNIWKQVVEQGLQRVLVLEDDVRFEPRFRSRLVTIMENVDRVGL
DWDLIYVGRKRLQVKQPERWVEGVSNLVHPDYSYWTLGYALSLQGAKRLLGARALGKMLP
VDEYLPVMFNKHPREEYMAQFEQRDLLAFSVEPLLLFPTHYTGEPGYFSDTETSTIWDDE
ATTTDWDRQNTQRSSKQDGQGRPMPPAIVKEGGGVPPTSSASNQRDEL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggagtggatcagaggggtgcagagccagtatcattctgtgaagtggacaccc
atggaagaaccaagctcgcatgtgggtgagttggggccgaagcactggcctaactctcgg
ttcacccacgtgatgaagctaaaacaggctgctctcaaatcagctagggctctctgggct
gattacatactgtttgtggacactgacaacttgctgaccaaccggcgggtgctgactgag
atgatagcagagaatttaacggtggtagcgcccatgttggagtcccgcgtcctctactcc
aacttctggtgtggcgtgaccccacagggttactacaaacgcacccctgagtacatcccc
atcaggaactggaaacgccagggctgcttcgctgttcccatggtgcactctaccttcctg
gtggacctgaggcggagcgctacccgggcgctggccttccaccctccacaccacgattac
accttccccctggatgacatcatggtcttcgccttctctgcgcggcgggcagatgtgcag
atgtacatatgtaatagagagcattatgggtatctgccactgcctctgaagcaagagcaa
agtctggaggaggaggtggagagctttagccacaccatgaccgaggctctgatcgattac
ctcatgaagccgtccaaatacatgcaccatacagctaaaccgctggaaaagatgggattt
gatgagatctttctgattaatctgaagcgtcgcattgaccggcgggatcgaatgctgagc
acccttgccgttctgggcattgatatcacactgacagaggcggtggatggcaaagccctg
aactcctcccagctgcaagcgatgggcatagacatgttgcctgggtacaaagacccgtat
tcggggcgtgtgctgacgcgaggggagatcggctgcttcctcagtcactacaacatctgg
aaacaggtggtggaacagggactgcagcgtgtgctggtgctggaggatgatgtgaggttt
gagccgcgtttccgcagcagactggtgaccatcatggagaacgtggaccgagtgggactg
gactgggatctgatctatgtggggcgtaagcggctgcaggtgaagcagccggagcgctgg
gtggagggggtcagtaacctggtacaccctgactattcctactggaccctgggttacgcc
ctctccttgcagggggccaagaggctcctgggagcccgggccctgggcaagatgctacct
gtggatgagtacctgcctgtcatgttcaacaagcacccaagggaggagtacatggcccag
tttgagcagagggacctgctggcgttctctgtggagccactgctcctcttccccacccac
tatactggcgagccgggctacttcagcgacacagagacctccaccatctgggacgatgag
gccacaaccaccgactgggaccggcagaacacccagcgaagcagcaagcaggacggccag
ggacggcctatgcccccagccatcgtcaaggaaggaggaggcgtgcccccaacctcctca
gccagcaatcaaagagatgaactctga
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