Salvelinus namaycush (lake trout): 120019926
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Entry
120019926 CDS
T07522
Name
(RefSeq) cadherin-7-like
KO
K06799
cadherin 7, type 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120019926
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Major cadherins
120019926
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
120019926
NCBI-ProteinID:
XP_038819265
UniProt:
A0A8U0P6V6
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Position
Sna25:37961244..38073639
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AA seq
798 aa
AA seq
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MRLNCPPMWSVISVLIVLVPIWEMGCSGLTLNSVPLHQVRMYQRSGEGGAHHRQRRSWVW
NQFFVLEEYMGDEPLYVGKLHSDVDKGEGQVKYVLNGEGATSIFTIDENTGDIHATKRLD
REEQAYYTLRAQARHRHTNLPVEPESEFVIKVQDINDNEPKFLDGPYSARVPEMSPVGTS
VVTVVATDADDPTYGNSARVVYSILEGQPYFSVEPRTGVVRTALPNMDREAREQYLLVIQ
AKDMVGQMGGLSGTTSVTVTLTDVNDNPPHFSRKSYQFSVAESLPLATTVAKIKALDSDV
GPNAEMEYRIVDGDGLGLFRITPDPDTQEGLITLQKGLDFETKSSYTLRVEASNRNIDLR
FLSLGPFSDTATVRLNVQNVDEPPVFSSPFSKMVISEEATVGTTIGTIFAHDPDSTNSPI
RYSIDRNTDLERFFNIDATTGVISTAKPLDREVNAVHNITIFATEILDPLQVGKGVVLIT
VTDINDNAPVFAIEYETYLCESARPGQVIETISAVDRDQPQSGHRFFFSLTADAAGNFNF
TLRDNKDNTASVLTKRGGFQRRHQNVYRLPVLIMDNGSPALSSTNTLSIRVCDCDPDGIP
QSCGSENAMLSAGLSTGALIAILACILTLLVLVLLIITMQRRRKKEPLILDEERDVRENI
VRYDDEGGGEEDTEAFDMVALRNLNVVRESGSKNRRDVTPEVPTLFSSSRPPPDNGIFRE
FIWDRLKEADVDPSAPPYDSLQTYAFEGSGSAAESLSSLDSLSMDSEQNYDYLSDWGPRF
KKLADLYGHNDGGNLFVS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgaactgtccccccatgtggagtgtgattagcgtgttgattgttctcgtaccc
atttgggagatgggctgctctggcctgaccttgaactcagtgcccctgcatcaggtcagg
atgtaccaaaggagcggcgaagggggggcacaccacaggcagaggcgcagctgggtgtgg
aaccagttctttgtgctggaggagtacatgggggacgagccactctacgtgggcaagctg
cactcggacgtggacaagggtgaaggccaggtgaagtacgtactcaatggagagggagct
acctccatcttcaccatcgacgagaacacgggtgacatccacgccaccaagcgtctggac
cgcgaggagcaggcttactacacgctccgggctcaggccaggcaccgccacaccaacctg
cccgtggagccagagtctgagttcgtcatcaaggtccaggatattaacgacaatgagccc
aagttcctggatggaccctactcagccagggtccccgagatgtccccagtgggcacatct
gtggtgacggtggtggcgacagatgcggacgaccccacgtatggaaacagtgccagggtg
gtgtacagtatccttgagggccagccctacttctccgtggaaccaagaacaggcgtggtc
aggacggctctgcccaacatggaccgcgaggctcgggaacagtatctgctcgtcatccag
gccaaggacatggtgggccagatgggaggactctccgggaccacctctgtcacggtgacg
ctcactgacgtcaacgacaacccaccacacttctctcgcaaaagttatcagttcagtgtg
gccgagtccctgccgttggccacgacggtagccaagataaaggcgctagactcagatgtg
ggacccaatgctgagatggagtacaggatcgtggatggggacggcctgggactgttccga
atcacccccgacccagacacacaggagggcctcatcactctgcaaaagggcctggacttt
gagaccaagtcgagctacaccctgcgtgtcgaggcgtccaatagaaacatcgacctgcga
ttcctgtccctggggccgtttagcgacacagcgacagtgcgcctcaacgtgcagaacgtg
gacgagccgcccgtcttctcctcgccgttcagcaagatggtaatctcggaggaggcaacg
gtaggcaccaccatcgggaccatcttcgcacacgacccagactccaccaacagtcccatc
aggtactctatagaccgcaacaccgacttggagcgtttcttcaacatagacgccaccacc
ggtgtcatcagcaccgccaagccgctggacagagaagttaacgctgtacacaacatcacc
atcttcgccacggagatcctggacccattgcaagtgggaaagggtgtagttctgatcaca
gtgacggacatcaatgacaacgcgcctgtcttcgccatcgagtacgagacctacctttgt
gagagtgccagacctggacaggtcattgagaccatcagtgctgttgaccgagaccagcct
cagagtggacaccgcttcttcttctctctgaccgctgacgctgctgggaatttcaacttc
accctgagagacaacaaagacaacaccgcttctgtgctgaccaagcgagggggtttccag
cgccgccaccagaacgtgtaccgcctccccgtcctcatcatggacaatgggagccccgcc
ctcagcagcaccaacaccctctccatccgggtgtgtgactgtgaccctgatgggatcccc
cagtcatgtgggagtgagaacgccatgctctcagcgggcctcagcaccggggccctcatt
gccatcctggcctgcatcctcacactactggtgctggtcctgttgatcatcaccatgcag
cgacggaggaagaaggagcccttgatcctggacgaggagcgtgacgtgcgcgagaacatt
gtgcgctacgacgacgagggcggcggcgaggaggacaccgaggcctttgacatggtcgct
ctgcgcaacctcaacgtagtccgcgagagcggcagcaagaaccgccgtgacgtcacccca
gaagtgcccaccctcttctcgtcttcccggccaccgccggacaatggcatcttccgcgag
ttcatctgggaccggctgaaggaggccgacgtggacccgtcagcaccgccctacgactca
ctgcagacgtacgccttcgagggcagcggctcagccgcagagtccctcagctcgctggat
tcgctgagcatggactcagagcagaactacgactaccttagcgactgggggccacgcttc
aagaaactggcagacctctatggccacaacgacggcggcaacctcttcgtctcttag
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