Salvelinus namaycush (lake trout): 120019954
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Entry
120019954 CDS
T07522
Name
(RefSeq) PDZ and LIM domain protein 2-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120019954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120019954
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120019954
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
120019954
NCBI-ProteinID:
XP_038819328
UniProt:
A0A8U0P653
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Position
Sna1:complement(25697890..25753512)
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AA seq
371 aa
AA seq
DB search
MALTVNLIGPTPWGFRIYGGRDFKKAITVSKVNGGSKAELAALQPGDVILEINGENTVDM
LNVEAQNKIKNSKTQLQLLVERPEPPSPEQTNGTTTEQLTGRFQEAVLVSRDENQNYREY
SISSPASLSPGLYSPEAPSSPEGKRERLTPTGTKSIQLRSWSTEEKTSSHRLSRPLSQEF
SSPDFRNNSVTSRTPTPPGHYSPHSPIDRELSVSPRRSSSGSDFAMQRFDRDSEVYKMIQ
ENKESRTAPRQSNTFRMLQEVLESDEKEAAVRFPGLSPKPTPPKPTSPGGGIPKYHTCEK
CGTSIVTQAVRIMDDRFRHPECYTCSTPECGLNLKMRGHFWVGEEMFCEKHARENYQGLG
TAPRATVSPRH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacagtaaacctgattggtccgactccatggggctttagaatatacggagga
agagacttcaagaaggcgataacagtttccaaggtcaatgggggcagcaaggccgagttg
gccgccctgcagcctggtgatgtcatcctggagatcaatggagagaacacagtggacatg
ctcaatgtggaggcccagaacaagatcaaaaactccaaaactcagctgcagctgctggtg
gagaggcctgagccccccagccctgaacagaccaacggaaccaccacagaacagctcact
ggacgcttccaggaggcggtgctggtgagtcgagatgagaaccagaactacagagagtac
tccatctccagcccagcctccctgtcacctggactctactccccagaggccccgtccagt
cctgaggggaagagagagaggctcacacccaccggcaccaagagcatccagctgcgttcg
tggtctacagaagagaagacatctagtcacagactgtccagaccactgtcacaggagttc
tcctctccggacttcaggaataactctgtgaccagtcgaacccccacccctccaggacat
tactcgccccacagccctattgatcgcgagctgtctgtctcccccagacgcagcagttct
ggctcggattttgccatgcagaggtttgaccgggattcagaggtctacaagatgatccag
gagaacaaggagtctcgcacggcccctcgacagtccaacaccttccgcatgctgcaggag
gttttggagtctgatgagaaggaggcagctgtgcggttcccaggactctcccccaaaccc
acccctcccaaacccacatcacccgggggcggaatccccaagtaccacacctgtgagaag
tgtggcaccagcattgttacacaggcggtgcgcatcatggacgaccgcttccgccaccca
gagtgctacacctgttctacaccagagtgcggtctcaacctgaagatgcgaggtcacttc
tgggtgggagaggagatgttctgtgagaagcatgcccgcgagaattaccagggccttggc
actgccccccgtgccaccgtctcacctcgccactga
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