KEGG   Salvelinus namaycush (lake trout): 120020006
Entry
120020006         CDS       T07522                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120020006 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120020006 (exosc4)
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120020006 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     120020006 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 120020006
NCBI-ProteinID: XP_038819355
UniProt: A0A8U0P717
LinkDB
Position
Sna25:15230051..15232012
AA seq 245 aa
MAGLELLSDQGYRLDGRKPAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG
SRSKTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVLTNLYPRSQ
IDIYVKILQSDGGNYSACVNAATLAVVDAGIPMRDYVCACTAGFVDETPLADLCHAEESG
GGTSLALALLPRGGHIALLQMDARLHQDHLETLMEAAMTACKGVSKVLDEVVRQHLQEVS
ALTGE
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcaggcttggaattattgtcagatcaaggatatcgtcttgatggaagaaaacctgct
gaactgcggaaagtacaagctcgtatgggtgtatttgcccaagctgacgggtctgcgtac
atagaacagggaaataccaaagcgctggcagttgtgtatggtcctcatgaagtgcgaggc
tcccgcagcaagaccctccatgaccgtgctgtcatcaactgccaatacagcatggctacc
ttcagtacagcggagaggaagagaagaccccacggggatcgcaagtccacagagatgagc
cttcacctcaagcagactttcgaggcagcagtgttgactaatctgtacccacgctctcaa
atagacatttatgtcaagatcttgcagtcagatggagggaactacagcgcatgtgtgaac
gccgccactctggcagtagtcgatgcgggcatccccatgcgtgactatgtgtgcgcctgc
actgcaggctttgtggatgagaccccattggcagacctgtgccatgctgaagagagtgga
gggggcacatcactggccctggcattgttgccccgtggcgggcacatcgccctgctacag
atggacgcccgactccaccaggaccacctagagacactgatggaggcggcaatgacggcc
tgtaagggcgtcagcaaagtgttggacgaggtggtaaggcagcatctacaggaggtgtct
gcgctgactggagagtga

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