Salvelinus namaycush (lake trout): 120020006
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Entry
120020006 CDS
T07522
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120020006 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120020006 (exosc4)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120020006 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
120020006 (exosc4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120020006
NCBI-ProteinID:
XP_038819355
UniProt:
A0A8U0P717
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Position
Sna25:15230051..15232012
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRLDGRKPAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG
SRSKTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVLTNLYPRSQ
IDIYVKILQSDGGNYSACVNAATLAVVDAGIPMRDYVCACTAGFVDETPLADLCHAEESG
GGTSLALALLPRGGHIALLQMDARLHQDHLETLMEAAMTACKGVSKVLDEVVRQHLQEVS
ALTGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcttggaattattgtcagatcaaggatatcgtcttgatggaagaaaacctgct
gaactgcggaaagtacaagctcgtatgggtgtatttgcccaagctgacgggtctgcgtac
atagaacagggaaataccaaagcgctggcagttgtgtatggtcctcatgaagtgcgaggc
tcccgcagcaagaccctccatgaccgtgctgtcatcaactgccaatacagcatggctacc
ttcagtacagcggagaggaagagaagaccccacggggatcgcaagtccacagagatgagc
cttcacctcaagcagactttcgaggcagcagtgttgactaatctgtacccacgctctcaa
atagacatttatgtcaagatcttgcagtcagatggagggaactacagcgcatgtgtgaac
gccgccactctggcagtagtcgatgcgggcatccccatgcgtgactatgtgtgcgcctgc
actgcaggctttgtggatgagaccccattggcagacctgtgccatgctgaagagagtgga
gggggcacatcactggccctggcattgttgccccgtggcgggcacatcgccctgctacag
atggacgcccgactccaccaggaccacctagagacactgatggaggcggcaatgacggcc
tgtaagggcgtcagcaaagtgttggacgaggtggtaaggcagcatctacaggaggtgtct
gcgctgactggagagtga
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