Salvelinus namaycush (lake trout): 120020010
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Entry
120020010 CDS
T07522
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120020010
09123 Folding, sorting and degradation
03018 RNA degradation
120020010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120020010
03041 Spliceosome [BR:
snh03041
]
120020010
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120020010
mRNA degradation factors
5'-3' decay
Lsm complex
120020010
Spliceosome [BR:
snh03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120020010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
GPAT_C
Motif
Other DBs
NCBI-GeneID:
120020010
NCBI-ProteinID:
XP_038819360
UniProt:
A0A8U0P6S7
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Position
Sna25:761824..770737
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AA seq
111 aa
AA seq
DB search
MADRNQDRNKEGEKKKKESIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTI
EYLRDPDDQFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaaaccaggacagaaacaaggaaggagagaagaagaagaaagagagtatc
tttgacctgtcaaagtacattgataaacaaatccgtgtgaagtttcagggcggacgagag
gccagtggagtcctgaaggggtttgaccccctgttgaacctggtattggacagcaccatc
gagtacttgcgggatcctgacgaccagttcaagttgactgaggacacgcggcagctgggc
ctggtggtttgtagagggacgtccgtggtgctcatctgtcctcaggatggcatggaagcc
atccccaaccccttcatccagcagcaggacggatag
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