Salvelinus namaycush (lake trout): 120020043
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Entry
120020043 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120020043
00071 Fatty acid degradation
120020043
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120020043
09143 Cell growth and death
04216 Ferroptosis
120020043
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120020043
03320 PPAR signaling pathway
120020043
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120020043
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120020043
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120020043
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120020043
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120020043
Exosomal proteins of breast cancer cells
120020043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120020043
NCBI-ProteinID:
XP_038819404
UniProt:
A0A8U0TL40
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All DBs
Position
Sna25:complement(26030018..26047888)
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AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVCSFITFLPWYFLSGAGTNLDRARRVKARSVSGRPAGPYR
ATNRAGGIHQKLVWSLHLGVDTLDKVMVHGATRFPERDCLGTREVLNEEDELQPNGKVFK
KVILGEYQWMSYEETYQAAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLKAILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNLVAVQELGSRPDNMAVARRQPLPSDIAVIMYTSGSTGIPKGVMISHSNII
AGITGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCISHGCRIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQMTKGYR
TPLCDSLVFRKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLVCSEITLKDWEEGGYYSTDKPNPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSDGQRWFCTGDIGELHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLTVLAEQRGLRGSWEEICNNPDMERDVLRIITEA
ALSAKLERFEIPKKIRLSAEPWTPETGLVTDAFKLKRKELKSHYQDDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaagaggacatgaacccgctgctgctgcaagtcttccgctcagtggtctgg
gtctgctctttcattaccttcctgccatggtacttcctctcgggtgccggcaccaaccta
gaccgggcacggcgggtcaaggcgcggtcagtgagcgggcgtccagcaggcccttaccgg
gcgaccaaccgggcgggcggtatccatcagaagctggtgtggtccttgcacctgggggtg
gacaccctggacaaggtgatggtgcacggggcgaccaggtttccagagagggactgcctg
ggcaccagagaggtgctgaacgaggaggacgagctccaacccaacgggaaggtcttcaag
aaggttatcctaggggagtatcagtggatgtcgtacgaggagacctaccaggcagcagtg
tgttttggcagtggtctggctgcgctgggccagaggcctcagtgtaacatcgccattttc
tgtgagaccagggctgagtggatgatagcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactctactctgggcggagcggccatcgcccacggtctcaacgaaaca
gagatcacccacatcatcaccagcaaagacctgctacacagccgtctcaaggccatcctg
ttagaggtgcctcggctgcagcacattatcgtggtggacagtaagccaaccagctggcct
ggcttcccccgcggcatcatggtccacaacttggtcgcggtgcaggagctgggctctaga
cccgacaacatggcggtggcacgccggcagcctctgccctctgacatcgctgtcatcatg
tacaccagcggctccaccggcatccccaagggtgtgatgatctcccatagcaacatcatc
gcgggcatcacgggcatggcagagcgcatcccagacctggatgagacagacacctacatt
gggtacctaccgctggctcatgttctggagctcagtgcagagatggtgtgtatctctcac
ggctgccgcatcggatactcctccccacagacgctagcagaccagtcgacaaagattaag
aagggcagtaaaggagacaccagtgttctgaagcctacactcatggctgctgtaccggaa
atcatggatcgcatctataagaatgtgatgacgaaggtggaggagatgagcagtgtgcag
agaaccctgtttgtgttggcctacaactataagatggaacagatgaccaagggctacagg
accccgctctgtgacagtctggtgtttaggaaggtgcgctcgttgttaggaggtcacatg
cgggtgctgttgtcgggcggagcgcccctttctgccgccacccagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcactgagacctgcggagctggcacc
atcagtgagatgtgggactacagcacaggccgggtcggagctcctctggtctgctctgag
atcaccctcaaggactgggaagagggcggttactacagcacagacaagcccaacccaaga
ggtgagattgtgatcggcgggcccaatgtgaccatgggttactacaagaacgaggtgaag
aaccgcgaggacttcttcgtggacagcgacggccagcgctggttctgtacgggagacatc
ggggagctccaccctgacggctgcctcaagatcatcgaccgtaagaaggacctggtgaag
ctccaggctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgtgcttacgcaaacagtgaccagtcatatgtgattggctttgtg
gtgcccaatcaaaagcagctgacagtgctggcggagcagagagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggaaagagacgtcctccgcatcatcacagaggct
gcactgtcagccaaacttgagcgctttgagatccctaagaagatccgtcttagtgcagag
ccctggaccccagagactggcctggttacggacgcattcaaactcaaacgcaaggagctc
aaatcacattaccaggatgatatcgaaaggatgtacggtggcaagtaa
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