Salvelinus namaycush (lake trout): 120020096
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Entry
120020096 CDS
T07522
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120020096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120020096
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120020096
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
Motif
Other DBs
NCBI-GeneID:
120020096
NCBI-ProteinID:
XP_038819461
UniProt:
A0A8U0P5F0
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Position
Sna25:689954..713464
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AA seq
921 aa
AA seq
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MDDLDAVRGLSPRPPPPEDSVSLSSSSTDIINLEDGHYSALLAELEADAQDLEGESWSVS
VDQQYIKRLHKDAIKRQDVIYELIQTEVYHMRTLKLLLSVYQYELRHNLQMEETRLDRMF
PQMDSLLHIHQHFLWCLRDCRDGQNHYTVTQLGAILINQFSGEMGERMKESYGDCCSHHT
DAVSFYKEQLQNNKKFQNLITKIGRLSIVRQLGVPECILLVTQRLTKYPFLVERILQNTD
ADSEEHDALAQALVLIRETISAVDSQVHDYERASWLRDIGSSLQPHSHGRLKDERVFKRE
DLAVGTRTLLHEGTVNWQAANGWLKGSLCMKDAQIMQSLTEKLRIFADMAEAVTGLEDVA
NHSRLLLHSDDLDPQQGETLLKGAITEVENLQNLLLSSVTLRDPYPPPEDFLGSRGYSLR
PEDLRLLRGGLGLGNLAALRRAETLGGYVCNPIPPMKNGNIQAGERPGSVAVQPLDRGQH
SNSDPQLQDLDQSESLELSADESPAPASYWTSPCPNPSFPEAEFFDRVLLLSQKLYSLLA
IVSQQDSHIELQRASLSEREHPGRSRGNVLLEQEKQRNMEKQREEMANFHKLQTQHRQEQ
ARCGEERERRQLQAEVLEVELRHREEECRRMKAKLAEERGELERWRETYQQDLERLREAT
RTVEKQKERLDLQMKLKKSKTIAKPGSFNFNTQQAVPHSQSFRGDLPHSASFRGDLSQSF
RGDLIGGWTTGGDVTPIPASKVHVQHSPSLATAFFLEPPPEAPLHRESISPAPPKAEVPI
HLISTTNQVVHKPGAVQQQIPTKLATLSSKGKEKSRKKGSHQRMHSAASIDMSQVVPIRV
TRKECGSLRGKGTVSPHRSYQSDRFFSPPEPLSNAKHSQTLLSNSSMRNSQSHFPPPEPP
RPPPFPKDIASKPTKERVIYL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctggatgctgtcagaggactttctcctcgaccccctcctcctgaggactct
gtgtccctctcctcgtccagcaccgacatcatcaacttagaagatggccactacagtgcc
ctgctagcggagttggaggctgatgctcaggacctagagggagagtcctggagtgtctct
gtggaccagcagtacataaagagactacacaaagatgctataaagaggcaagatgtcatc
tatgagttgatccagactgaggtgtaccacatgcggaccttgaagctgctgctgagtgtg
taccagtatgagctgagacacaacctacagatggaggagactaggctggacaggatgttc
cctcagatggacagcctgctgcacatacaccaacacttcctgtggtgtcttagagactgc
cgcgacggacagaatcactacacagtcacacagctgggagctatactcatcaaccagttt
tcaggtgagatgggagagaggatgaaggagagctatggagactgctgcagtcaccacaca
gatgctgtcagcttctacaaagaacagctacagaacaacaagaagttccagaacttgatt
acgaaaatcggtcggttgtccatcgtgcggcagttaggagtcccagaatgtattctgttg
gtgactcagcggctcacaaagtacccctttctggtcgaacgcattctacagaacactgat
gctgacagtgaggagcacgatgccctggcccaagccctggttctgatcagagagacaatc
tctgctgtggactctcaggtccatgactatgagagggcctcttggttgagagacatcggc
agcagtttgcaacctcattcccacggcaggctgaaggacgaaagggtgttcaagagagag
gacctggcagtggggaccagaaccctgctccatgaggggactgtcaactggcaggcagcc
aacggatggctgaaagggagtctatgtatgaaggatgcccagatcatgcagagcctgaca
gagaagctgcgtatctttgctgacatggcggaggctgtaacagggctggaggatgtagct
aatcactctcgtctgctgctccacagtgacgacttagacccccagcagggggagacactg
ctcaagggggccatcactgaggtggagaatctgcagaaccttctcctgtccagtgtgact
ctgagagacccctacccccctccagaggacttcctgggatcacggggatacagtttgagg
ccagaagatctacggctccttcgaggggggctaggccttgggaacctggccgcactcagg
agagccgaaaccttagggggctatgtctgcaatcccataccccctatgaagaatggtaat
atacaggctggagaacggccaggcagtgtggcggtacaacctctagacagaggtcagcat
tcaaactctgacccccagctacaggaccttgaccagtcagagagtctggaactgtcggct
gatgagtcaccagcaccagcatcatactggacttctccatgcccaaatccatcctttcct
gaagcggagttctttgacagagtgctgctgctctcacagaaactctacagtctgctggcc
atcgtgtcccagcaggacagccacattgagttgcagcgtgcctcgctgtcagagcgtgag
catccgggccgttctcgtggaaatgtgctcctggagcaggagaaacaacgtaacatggag
aaacagagagaggagatggctaacttccacaagctgcagacacagcacagacaagaacag
gctcgctgcggggaggagcgggagcgtcgccagttgcaggcggaggtcctggaggtggag
ctaagacacagagaggaggagtgtaggagaatgaaggcgaagctagcagaggagaggggg
gagctggagagatggagagaaacctaccaacaggatctggagaggctgagagaggctaca
aggactgtggagaaacagaaggaacgcctggatttacagatgaagttgaagaagagcaag
accattgccaaacctgggagttttaacttcaacactcagcaggctgtcccccactcccag
tcgttccgaggggacctcccccactctgcttccttccgaggggacctctcccagtcgttc
cgaggggacctgattggtggttggaccacgggaggtgacgtgacccccatcccggcctct
aaggtccacgtccaacacagcccctctctagccacagctttcttcctggagccgccccca
gaggcgccccttcatagggagagcatcagccctgcgccccctaaagcggaggttcccatt
cacctgatcagcaccaccaaccaggtggtccacaagccaggggctgtgcagcagcagatc
cccaccaagctggctaccctcagcagcaagggcaaggagaagagcagaaaaaagggatcg
caccagcgcatgcatagtgcagcatctatagacatgtctcaggtggtgccgatcagagtg
acaagaaaagagtgcgggagtctgcgagggaaggggactgtgagtcctcacaggagctac
caatcagatcgtttctttagtcctccagagcctctgtccaatgccaagcactcccagacc
ctgttgtccaacagcagcatgaggaacagccagagccacttccctccacccgaacctccc
cgtcctccccccttcccaaaagacatagcaagcaaaccaaccaaggaacgcgtaatctac
ctgtaa
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