KEGG   Salvelinus namaycush (lake trout): 120020115
Entry
120020115         CDS       T07522                                 
Name
(RefSeq) cullin-3-like
  KO
K03869  cullin 3
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04120  Ubiquitin mediated proteolysis
snh04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120020115
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    120020115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:snh04121]
    120020115
   03400 DNA repair and recombination proteins [BR:snh03400]
    120020115
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     120020115
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120020115
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 120020115
NCBI-ProteinID: XP_038819491
UniProt: A0A8U0P5H1
LinkDB
Position
Sna25:complement(2165195..2182409)
AA seq 766 aa
MSNLKGGVKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLVNKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLEGRTVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVLHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCTIPPSPRHAFEVFRRFYLAK
HSGRQLTLQHHMGSADLNATFHGLIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
MLFNNREESTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcggcgtcaagaaagacaccaagatgaggataagagcctttcct
atgacaatggatgagaagtatgtcaacaacatctgggaccttctgaagaacgccatccag
gagatccagaggaagaacaacagcgggctgagcttcgaggagctctacaggaacgcctac
accatggtgctgcacaaacacggcgagaagctctacacaggcctgcgtgaggtcgtcacc
gagcacctcgtcaacaaagtacgagaagatgtcctcaactcattaaacaataacttcctg
cagacattaaatcaagcttggaatgatcaccagacggcaatggtcatgatccgagacatc
ctcatgtacatggaccgggtgtacgtgcagcagaacaacgtggagaatgtgtacaacctg
ggcctgatcatcttccgagaccaggtggtgcgctacggctgcatccgagaccacctccgc
cagaccctgctggacatgatcgcacgcgagaggaagggcgaggtggtggataggggagcg
atcaggaacgcctgtcagatgctgatgattctcggcctggagggcaggactgtgtacgag
gaagactttgaggccccattcttagaaatgtctgcagaattcttccagatggagagccag
aagttcctagcggagaacagtgccagtgtgtacatcaagaaggtggaggccaggatcaac
gaggagatagagcgggtgctgcactgcctggataaatccacagaagagcccattgtcaag
gtggtggagcgggagctcatctccaaacacatgaagaccatcgtggagatggagaactct
ggcctggtccacatgctcaagaacggcaagaccgaagacctgggctgcatgtacaagctg
tttagccgtgtgcctaacggcctgaagaccatgtgtgagtgtatgagctcctacctgagg
gagcagggcaaggctctggtgtcagaggagggagagggcaagaaccctgtcgactacatc
cagggcctgttggacctgaagacgcggttcgaccgcttcctcctggagtcgttcaacaac
gaccggctcttcaagcagaccatcgccggagactttgagtacttcctcaacctaaactcc
cgttcccccgagtacctctccctcttcatcgacgacaagctcaagaagggagtcaaaggg
ctgacagagcaggaggtggagtcgatcctggacaaggccatggtgcttttccggttcatg
caggagaaggatgtgtttgagaggtactacaaacagcacctggcccggaggctgctcacc
aacaagagtgtctccgacgactctgagaagaacatgatctctaagctgaagactgagtgt
ggctgtcagttcacctctaaactggaagggatgttcagagacatgagcatctccaacacc
accatggacgagttcagacaacacctacagtccacgggggtgtctctagggggggtcgac
ctcaccgtaagagtactcaccactggctattggcccacgcagtcggccacgcccaagtgc
accatccccccctcccccagacatgcctttgaggtctttagaaggttctacttggccaaa
cacagcggcagacagttgacactccagcaccacatgggctcagcagacctcaatgccacc
tttcacggtctcatcaagaaggaggatggttcggaggtaggagtgggaggagcacaggtg
acaggctcgaacaccaggaaacacatactgcaggtctctactttccagatgaccatcctc
atgctcttcaacaacagagaagagtccaccttcgaggagatccagcaggagacggacatc
ccggagagggagctggtgcgagcgctgcagtcgctggcctgcgggaagcccacccagcgc
gtcctcaccaaggagcccaagtccaaggagatcgagaacggccacgtgtttacagtcaac
gatcagtttacctccaagctgcacagagtcaaaatacagacagtcgctgctaagcagggg
gagtctgaccctgagagaaaagagacgcggcagaaggtagacgacgacaggaagcacgaa
attgaagcagccatcgtccgcatcatgaagtccaggaagaagatgcagcacaacgtcctg
gtagcagaggtaacccagcagctgcgggcccggttcctccccagccccgtggtcattaag
aagcgcattgaaggacttatagagagagaatacttggcacggacgcccgaggaccgcaaa
gtctacacctacgttgcataa

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