Salvelinus namaycush (lake trout): 120020152 Help Entry 120020152         CDS       T07522                                  Name (RefSeq) collagen alpha-1(II) chain-like   KO K19719   collagen type II alpha Organism snh  Salvelinus namaycush (lake trout) Pathway snh04510   Focal adhesion snh04512   ECM-receptor interaction snh04518   Integrin signaling Brite KEGG Orthology (KO) [BR:snh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120020152    04518 Integrin signaling     120020152  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120020152  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120020152 Glycosaminoglycan binding proteins [BR:snh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120020152 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  120020152 NCBI-ProteinID:  XP_038819558 UniProt:  A0A8U0TL34 LinkDB All DBs Position Sna2:complement(1929369..2012352) Genome browser AA seq 1460 aa AA seqDB search MFSFVDSRTVLLLVATQVILLAVVKCQDEDPEKRRKLTLAARDQSGHSIRRQVERGRRGT WKERNKVEGEERGRRGTTWKERNNVEGEEQRGRRGTTWKERNNVEGEERGRRGTTWKERN DVEGEERGRKGTTWKERNNVEGEERGRRGTWKERNNVEGEEQRGRRGTTWKERNNVEGEE RGRRGTWKEVRGPQGFQGNHGEAGEPGSAGPLGPRGPPGPSGKPGDDGEAGKPGKGGERG PSGPQGARGFPGTPGLPGIKGHRGYPGLDGLKGEGGAAGSKGESGAPGENGAPGPMGPRG LPGERGRPGPSGSAGARGNDGLSGPAGPPGPVGPSGAPGFPGSPGSKGEAGPTGARGPEG AQGPRGESGTPGSPGPAGASGNPGTDGIGGSKGSAGAPGIAGAPGFPGPRGPPGPQGATG PLGPKGTSGDPGIPGFKGDAGPKGELGPSGPQGALGPAGEEGKRGPRGEPGAAGPLGPPG ERGAPGNRGFPGQDGLAGPKGAPGERGVGGVSGPKGAGGDPGRPGEPGLPGARGLTGRPG DTGPQGKVGPGGAAGEDGRPGPPGPMGARGQPGVMGFPGPKGANGEPGKGGEKGLLGAPG LRGLPGKDGETGAAGPPGPAGPAGERGEQGQPGPSGFQGLPGPPGPPGEGGKPGDMGVPG EGGAAGVTGPRGERGFPGERGGAGPQGLQGPRGLPGTPGTDGPKGAIGPGGASGAQGPPG LQGMPGERGASGIPGPKGDRGDNGEKGPEGASGKDGSRGLTGPIGPPGPGGPNGEKGESG PSGPSGAAGARGAPGDRGETGPPGPAGFAGPPGSDGQSGAKGEQGEGGQKGDAGAPGPQG PSGAPGPSGPTGVFGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGAAGPSGPAGKDG PKGVRGDGGPPGRQGDAGLRGTAGAPGEKGDAGEDGPSGPDGPSGPSGLAGQRGIVGLPG QRGERGFPGLPGPSGEPGKQGAPGGSGDRGPPGPVGPPGLTGPAGEPGREGNAGSDGPPG RDGSTGIKGDRGNTGPAGAPGSPGANGSPGPVGPTGKQGDRGEAGAQGPAGPAGPAGARG MAGPQGPRGDKGEAGEGGERGQKGHRGFTGLQGLPGPPGQSGDQGASGPAGPSGSRGPPG PVGPSGKDGSNGMPGPIGPPGPRGRSGETGPSGPPGNSGPPGPPGPPGPGIDMSAFAGLS QPEKSPDPLRYMRADQASGNLRTHDAEVDATLKSLNNQIENIRSPEGSKKNPARTCRDLK LCHPDWKSGEYWIDPNQGCTIDAIKVYCNMETGESCVYPKPASIPKKNWWSSKSKAAKHV WFGETMNGGFHFSYGDASLAANTASIQMTFLRLLSTEASQNLTYHCKNSVAYMDGATGNL KKAVLLQGSNDVEIRAEGNSRFTYTVMEDGCTKHKGTWGKTVIEYRSQKTSRLPIVDIAP VDIGGADQEFGVDVGAVCFL NT seq 4383 nt NT seq  +upstreamnt  +downstreamnt atgtttagctttgtggattcgaggactgtactgctacttgtagcaacccaagtcattcta ttagccgttgtcaaatgtcaggacgaagaccctgaaaagcgccggaagttaacgttggca gctcgagatcaatcaggccattccattaggcgtcaagtggaacgtggaaggagaggaacg tggaaggagaggaacaaagtggaaggagaggaacgtggaaggagaggaacaacgtggaag gagaggaacaacgtggaaggagaggaacaacgtggaaggagaggaacaacgtggaaggag aggaacaacgtggaaggagaggaacgtggaaggagaggaacaacgtggaaggagaggaac gacgtggaaggagaggaacgtggaaggaaaggaacaacgtggaaggagcggaacaacgtg gaaggagaggaacgtggaaggagaggaacgtggaaggagaggaacaacgtggaaggagag gaacaacgtggaaggagaggaacaacgtggaaggagaggaacaacgtggaaggagaggaa cgtggaaggagaggaacgtggaaggaagtcagaggcccacaaggtttccaaggcaaccac ggagaggctggagagcccggatcagctggcccgttgggtccccgtggtccacccggaccc tctggtaaacctggagatgatggtgaggctggcaaacccggcaaaggtggtgaacgtgga ccttctggtcctcagggagctcgtggattcccaggaactcccggtctgcctggaatcaag gggcacagaggttatccaggtcttgatggactcaagggagagggtggagcagctggttct aagggtgagtctggtgctcccggtgagaatggcgctcctggaccaatgggaccacgtggt ctgcccggtgagagaggtcgccccggaccctctggttctgctggtgctcgtggtaatgac ggtctgtctggccctgctggtcctcctggcccagttggtccttctggtgctccaggcttc cccggctctccaggttctaagggagaagctggccccaccggtgctcgtggacctgagggc gctcagggaccccgtggtgagtcaggaacccctggatctcccggacccgccggtgcatct ggtaaccctggtactgatggtattggaggatctaaaggatcagctggtgcacctggtatc gctggcgcgcctggcttccccgggccccgtggccctccaggaccccagggagccactgga cctctcggaccaaagggaacatctggtgaccccggtatcccaggtttcaagggtgatgct ggacccaagggagagcttggaccgtccggtccccaaggagcacttggccctgcaggagag gaagggaagaggggacccagaggagagcccggtgctgctggacctcttgggcctcccgga gagagaggcgcccccggtaaccgtggtttcccaggtcaggatggtctggctggtcccaag ggagcccctggcgagcgtggagtcggcggcgtgtctggccctaagggagccggcggtgac cctggacgccctggcgagcccggtcttcctggcgcaagaggtcttactggtcgtcctggc gatactggtcctcaaggcaaagttggacctggtggtgctgctggtgaagatggtcgcccc ggaccccctggccctatgggagcccgcggtcagcctggtgtgatgggattccccggaccc aaaggagccaacggtgagcctgggaagggaggagaaaagggactacttggtgccccaggt ctgaggggtcttcctggaaaggatggtgagaccggagctgctggcccacctggacctgct ggccctgctggagaaagaggagagcaaggacagcctggaccttctggcttccagggtctg cccggacctcccggcccacctggtgagggaggcaagcccggtgacatgggtgttccagga gagggtggagctgctggtgtcactggacccagaggtgagcgtggtttcccaggagagaga ggaggtgctgggcctcaggggctacagggacctcgtggtctgcctggaactcctggaact gacggacctaagggagcgatcggaccaggtggtgcatcgggtgcccagggaccccccggt ctgcagggtatgcccggagagagaggagcctcaggcatccccggacctaagggagacaga ggtgacaacggagagaagggaccggagggtgcttctggcaaagacggctcaagaggtttg actggtcccattggtcctcccggcccaggtggtcccaacggagagaagggtgaatctggt ccatctggaccttccggtgctgccggtgcccgtggtgctcctggagacaggggtgagacc ggacctcctgggcctgctggcttcgctgggcctcctggatctgatggtcagtccggagcc aagggagagcagggagagggcggccagaagggagacgctggtgctcctggaccccaggga ccctctggagctcctggaccttccggacctactggcgtttttggacctaaaggtgctcgc ggtgctcagggaccccctggtgccactggtttccctggcgctgccggcagagtcggaccc cctggtcccaacggtaaccctggtgctgctggtccctctggccctgctggtaaagatggt cctaagggtgtgcgtggagacggtggacccccaggcaggcagggagacgctgggctgcgt ggaaccgctggagcccctggagagaaaggagatgctggagaggatggtccctctggtccc gatggtccttcaggtccttcaggtctggctggacagcgtggtattgttggtcttccagga cagcgtggagagagaggtttccctggcttgcccggaccctctggagagcctggtaaacaa ggagctcctggtggaagcggagaccgtggaccccctggcccagtgggaccccctggactg actggacccgctggagagcccggtagagagggcaacgctggttctgatggaccacctggt agagatggatccactggaatcaagggtgaccgtggtaacaccggtcctgctggtgctcct ggctccccaggtgctaatggttcccccggccctgtcggccccaccggcaagcaaggagac aggggagaggctggagctcaaggacccgctgggcctgccgggcctgctggagccagaggg atggctggaccccaaggaccccgtggagacaagggtgaggctggagagggtggcgagaga ggacagaagggacacagaggattcactggtctgcagggtcttcccggacctcccggtcaa tctggagatcagggtgcctctggacctgccggaccaagtggatcaagaggacctcccgga cctgttggtccctctggaaaggatggttccaacggtatgcccggccccatcggacccccc ggacctcgtggtcgctctggagagacaggcccctctggtccacctggaaactctggaccc cctggtccccctggtcctcccggccctggtatcgacatgtctgccttcgctggtctgtct cagcctgagaagtcccccgatcctctgaggtacatgagggccgaccaggcctccggaaac ctgaggacgcacgacgccgaggtggacgccacgctcaagtccctcaacaaccagatcgag aacatccggtcccccgagggctccaagaagaaccctgcacgtacttgcagagacctgaag ctgtgccaccctgactggaagagtggagagtactggatcgaccctaaccagggctgcacc atagacgccatcaaggtctactgtaacatggagactggagagtcctgcgtctaccccaag cccgccagcatccccaagaagaactggtggtccagcaagagcaaggctgccaaacacgtc tggttcggagagaccatgaacgggggattccacttcagctatggtgatgccagtctggca gccaacactgccagcatccagatgaccttcctgcggctgctgtccaccgaggctagtcag aacctcacctaccactgcaagaacagcgtggcctacatggacggggccacgggcaacctg aagaaggccgtgctgctccagggctccaacgacgtggagattagagccgagggcaacagc cgctttacgtacaccgttatggaggacggctgcacgaaacataaaggaacgtggggaaag acagtgattgagtaccgatcccagaagaccagccggctgcccatcgtggacattgctcct gtagatattggaggagcggaccaggagtttggggttgacgtcggcgcagtttgcttcttg taa

DBGET integrated database retrieval system