Salvelinus namaycush (lake trout): 120020167
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Entry
120020167 CDS
T07522
Symbol
itga7
Name
(RefSeq) integrin alpha-7
KO
K06583
integrin alpha 7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120020167 (itga7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120020167 (itga7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120020167 (itga7)
04810 Regulation of actin cytoskeleton
120020167 (itga7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120020167 (itga7)
04515 Cell adhesion molecules [BR:
snh04515
]
120020167 (itga7)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120020167 (itga7)
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin alpha subunits
120020167 (itga7)
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Motif
Other DBs
NCBI-GeneID:
120020167
NCBI-ProteinID:
XP_038819583
UniProt:
A0A8U0P6L9
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Position
Sna2:complement(2302560..2383791)
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AA seq
614 aa
AA seq
DB search
MAPHVVHGVSLSQPWCLPLLLLLLSLYSLTVAGFNLDTSMTLIKEGEKGSFFGFSVALHQ
QLTPEPHSWILVGAPRDRGLGLMRRQRPGALYRCPITGEKFDCERVDIDGDVNLDRESKD
NQWLGVTVKSQGIGGKVVTCAHLYELRQRVGLPSETRDPIGRCYVLSEDLTEKDDLDGGE
WKFCEGRPQGHEQFGFCQQGLSAAFTPDNNFIMFGAPGTYNWKGEMRVQLLNQTLLDLGF
YDDGPYEVADEKQLNAQLIPVPYHSYLGLLFMASPDEDALVYKTLEPHSNWPMFEDVAQN
SYLGLVARPHQLFFSGVVKGESAMETLDDVGSALDFEFTVTNTGPSLQTLGSAFLNIMWP
HELSNGKWLLYPTAFHFQGHPETHCRPHTSLNPRKFSHSSPSEDQPQATFRRKGRSHPEE
EGHVMTKGSLGRTTPAVAASERRKSLKLDCLLGSARCVLFQCPLHSFSGSAVLKIQGRLW
NSTFLEEFPSVSALELLVRANITVKSSIKHLVLRDAAAQVPVMIYPEVGLTAQYWIPWWW
ILIAILAGILVLSLMVCILWKCGFFRRVQYEDKVPQYHAVKIPHQDLPQFHESQQKAGIL
HKKEWATHWSDGTS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacacgtggtacatggagtctctctttcacagccctggtgtcttcctctcctt
ttgctccttctctccctgtattccctgacggtcgcagggttcaacctggatactagcatg
actctgatcaaggagggggagaaagggagcttttttggattttctgtagcacttcaccag
caactcaccccagaaccacacagttggatactggtgggagctccccgggacagaggactg
ggcctcatgcggagacagcgtcctggtgccctgtaccgctgtccaatcacaggcgagaag
tttgactgcgagcgagtggacatcgatggagatgtaaaccttgaccgggagagcaaggac
aaccagtggctaggagtgacagtcaagagccaggggattggagggaaggtggtgacctgt
gcccacctgtatgagctgcgtcagcgtgtgggcctgccgtctgagacgcgggaccctatc
gggcgttgctatgtcctgagtgaggacctgacagagaaggatgacttggacggaggagag
tggaagttctgtgaggggcgaccccagggacacgaacagtttggcttctgtcagcagggc
ctgtctgccgccttcacaccagacaataacttcatcatgttcggcgctccaggaacgtac
aactggaaaggagagatgcgtgtccagctgctaaaccagacactgttggatcttggtttc
tatgacgacggaccttatgaggtggcggatgagaaacagctgaacgctcagctgatccca
gttccctaccatagttacctggggctcttgttcatggctagtcctgatgaagatgcgctg
gtgtacaaaactctggagccacactccaactggcccatgtttgaggacgtagctcaaaat
agctacttaggtttggtggcccggccacaccagctgttcttcagtggagttgtgaagggg
gagagtgctatggagactctggacgatgtgggcagcgctctggactttgagtttacggtg
accaacactgggccgtccctgcagactctaggctctgccttcctcaacataatgtggcct
catgagctgtccaatgggaagtggctcctgtaccccaccgcttttcacttccagggccat
ccagaaacacactgtagaccccacacctccctcaacccacggaagttttcccacagctct
ccttctgaagaccagccacaggctacattcaggaggaaggggcgatcccacccggaagag
gaggggcatgtgatgaccaagggcagtctgggtaggaccacgcccgctgtggctgcctcc
gagagacggaagtcactcaaactggactgtctgctgggttcagcacgttgtgtcctgttc
cagtgtcctctccacagcttctctggctcggctgtcctcaagatccagggacgcttgtgg
aacagcaccttcctggaggagttcccatcagtcagtgctctggagctgctggttagagcc
aacatcacagtcaagtccagcatcaaacacctggtgctgagggatgctgctgcacaggtc
ccagtgatgatttacccagaggttggtctgactgcccagtactggatcccctggtggtgg
attctcatagccatcctggctggtatcctggtgctgtccctgatggtctgcatcctctgg
aagtgtggtttcttccgtcgggtccagtatgaagacaaagtgcctcagtaccatgcggtg
aagattccccatcaggacctgccccagttccatgagagccagcagaaggcagggatcctc
cacaagaaagagtgggctacacactggagcgatggaacttcctga
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