KEGG   Salvelinus namaycush (lake trout): 120020169
Entry
120020169         CDS       T07522                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120020169
   04121 Ubiquitin system [BR:snh04121]
    120020169
Enzymes [BR:snh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120020169
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120020169
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120020169
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-C3HC4 KH_BICC1_1st KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Prok-RING_4 zf-RING_5 Mito_fiss_reg
Other DBs
NCBI-GeneID: 120020169
NCBI-ProteinID: XP_038819584
UniProt: A0A8U0TLA1
LinkDB
Position
Sna25:7192480..7202011
AA seq 653 aa
MPSPLFHPEIMDHDMVVSSQHNGVSLPRETDQESRDEDHQDALRFALDQLSFMALEKVDC
GGGGLVDTLDGNQGPCSGNSNGGYVDLQMLEHQGGSRDSPTSCSPSPEYYGSSGYHMTGP
HSHPMLGEQSSVLCNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPV
RGEEPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGATGTGAPGTGGALPGPPHL
PGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVDRA
REEIETHITLRTGAFVDLQGDNDFHTNGTDVSLEGLGSLAGGLGAALWARANNPHPAPPP
PPPPPPPPLPMAMHQSSGRKLSSSASYHQHNGGMGSECYSAPRRATEGGSPTSPFSTSSS
NAGGGGGFTFGGDSTPGLPSEELGFEFSASNIWAPFVNGGGGKIPGTSQKQPLRRNSSGL
SGGAITPRLSPTLPPDAVVGPLDHQLARRAQSDPLSTLSWLQSGGAGAGSFSGASSSSSG
GSSTGYSSCSASSLPGGSPTDSEGGGSCVGLGSGMLGRLKAAAGAGAGGLVGMGPGGVSR
DCFVCFESEVTAALVPCGHNLFCMDCAGQICQSAEPECPVCHTTATQCIRIFS
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgcctagccccttattccaccccgagattatggaccacgacatggtagtgagcagccag
cacaacggggtcagcctgccgcgagagactgaccaggagtcccgggacgaggaccatcag
gatgcgctccgcttcgccctggaccagctgtcatttatggccctggagaaggtggactgt
ggtggtggggggctcgttgacacgctcgacggtaaccagggaccgtgctccgggaattcc
aacggcggttatgtcgacctgcagatgctggagcaccaaggaggctcccgggactccccg
acatcctgctccccgtctccagagtactatggatcgagcgggtaccacatgactggcccg
cactctcaccccatgctcggtgaacaaagctctgttctctgcaatcgcaagaggagtgtc
aacatgaccgaatgcgtacctgtgcccagctcagaacacgttgctgaaatagtgggaaga
cagggctgtaagatcaaggcactgcgtgcgaagaccaacacctacataaagaccccagtg
agaggtgaggagcccgtgttcatagttacagggcgcagggaggacgtggagatggccaag
cgggagatcgtctctgcggccgagcacttctccatgatccgggcatcccgctgcaaggct
ggggccacgggcacaggagcacccgggacagggggagcgctccctggacccccccacctg
cctggacagaccactatacaggtgcgggtaccgtatcgtgtggtggggttagtggtgggg
cccaagggggcgaccatcaagcgcatccagcagcagacgcacacctacatcgtgacgccc
agcagggagaaggaccccgtgtttgaggtgacgggcatgcctgagaatgtggaccgagct
cgggaggagattgagacgcacatcaccctgcggaccggggcctttgtggacctccaggga
gacaacgacttccacactaacgggactgacgtcagcctagagggcctgggttcgctggct
ggggggctgggcgctgctctctgggctcgggccaacaacccccaccctgcccctccaccc
ccgccgccgcctccaccacccccgctccccatggccatgcaccaatcttctgggaggaag
ctgtcctcctcggcctcctaccaccaacacaacggagggatgggctctgagtgctacagc
gcccccaggagggccaccgagggaggtagccccaccagcccattcagcactagctccagc
aatgccggcggaggaggggggttcaccttcgggggtgactccaccccaggcctcccctct
gaggagctgggctttgagttcagcgcctccaacatctgggcccctttcgtcaacggagga
ggagggaagatcccaggcacctctcagaagcagcctctccgcagaaacagcagcggcctg
agcggcggtgcaatcaccccccgcctgtcccccaccctgccccccgacgcagtggtggga
cccctggatcatcaactggcccgtcgggcccagagtgacccactcagcaccctctcctgg
ctgcagtcgggcggtgccggtgcagggtccttctctggagcgtctagctccagctccgga
gggtcatccaccggttactcctcctgctcagcttcctccctgcccggaggctctcccacc
gattcagagggcgggggtagctgcgttggcctgggctctggcatgctgggccggctgaag
gccgcggcaggcgctggtgctggaggtctagttggcatggggccagggggcgtgagcagg
gactgctttgtgtgctttgagagcgaggtgacagcggctctggtgccatgcggacacaat
ctgttctgcatggactgcgccggacagatctgccagtccgctgagcctgagtgccctgtc
tgccataccactgccacacagtgcatccgtatcttctcctaa

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