Salvelinus namaycush (lake trout): 120020212
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Entry
120020212 CDS
T07522
Name
(RefSeq) DDB1- and CUL4-associated factor 8-like isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120020212
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120020212
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GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
120020212
NCBI-ProteinID:
XP_038819654
UniProt:
A0A8U0TK40
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Position
Sna25:10417868..10444648
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AA seq
631 aa
AA seq
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MALSCPSAADIRLSFCPQEERNRMAEADGKSSVLNDGSEEPDPGEDQRGEGDASAATEGH
SGSQAAPREAGDEAKDKLMPDAKVARVPGEEEEEDTDSMDGSGLYSLTEEGERESEGGRR
ERVNERDAGKRAARKRNRPSGGTTHHSSSSDEDDDDEEEEEDQEEEEDEQAMDAWLGAEL
RDLSGPSWRAVPSLKSREIGRGSHQFVRRVCGARGLVQRLELQGRLERHTGCVNTLHFNP
SGTRLASGSDDLRVVVWDWARRRAELEFDSGHKSNVFQAKFLPHSGDSTLAMCARDGQIR
VAELSATQRCKNTKRVAQHKGAAHKLALEPDSPCSFLSAGEDAIVFAIDLRLDRPANKLV
VVKEGDKKVGLYTIFVNPVNTHHFAVGGRDQYVRIYDQRKINENENNGVLKKFCPSHLVS
SESKTNITCLVYSHDGTELLTSYNDEDIYLFDSSHSDGADYRRRYKGHRNNATVKGVNFY
GPSSEFVISGSDCGHIYLWDKVSARIVQFMEGDRGGVVNCLEPHPHLPGLATSGLDHDVK
LWSPTAENLTGLKGLKDVMRKNKRERDEDSVRHGDQYDTQLLWFLMRHMRNRRPQRTRRE
GAEGDTDESWSSPDSSDEEDGGPDHVQCMSS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctctttcttgtccctctgcagcagacataaggctctccttctgtccacaggaagaa
agaaacaggatggcagaggcagatggtaaatccagtgtgcttaacgatgggtctgaggag
ccagatccaggagaagaccagcgaggggagggagatgcttctgcagccacagagggccac
tctggctctcaagcagctcccagagaggcaggagacgaggctaaggacaagctaatgcca
gatgctaaggttgcaagggtgcctggagaggaggaggaggaggacacagatagcatggac
ggcagtggcctctactccctgaccgaggaaggggagcgagagagcgagggaggtagaaga
gagagagtgaatgagagggatgcaggaaagcgggccgccagaaagaggaaccgcccaagt
ggtggcaccacccaccactcctccagctctgacgaggatgacgatgatgaggaagaggag
gaagatcaagaggaggaagaggatgagcaggccatggacgcgtggttgggggcggagctg
cgtgacctcagcgggccgtcatggcgggcggtgccctccctgaagtcgagggagattggc
cggggctcgcaccagtttgtgaggcgtgtgtgtggtgcacgaggcttggtccagaggctg
gagctccaggggcgcctggagagacacactggctgtgtgaacaccctgcacttcaacccc
tcaggcacacgcctggcctccggcagtgatgacctgcgggtggtagtgtgggactgggca
cgtcgccgtgctgagctcgagtttgacagcgggcataagagtaacgtctttcaggcaaag
ttcctgccacacagtggagactccaccctggccatgtgtgcccgggatggtcagatcaga
gtggctgagctctctgccactcagcgctgcaagaacaccaagagagtggctcagcataaa
ggggcagcacacaagctggccctggagccagactctccctgctccttcctgtcggctggg
gaggacgccatagtgtttgccatcgacctgcgcctcgaccggcctgccaataaactggtg
gtggtgaaggagggggataagaaagtggggttgtacaccatatttgtgaaccctgtcaac
acacaccactttgctgtgggtgggagagatcagtatgttaggatctatgaccagaggaag
attaatgagaatgaaaataatggcgtactgaagaagttctgtccatctcacctggtatcc
agcgagtccaaaactaacattacctgcttagtgtacagtcatgatggcacagagctcctc
actagttacaacgatgaggatatctacttgtttgactccagccacagtgacggtgcagac
taccgcaggagatacaagggccatcgcaataacgctacagtgaaaggggtgaacttctac
ggccctagcagtgagtttgtgatcagtggcagtgactgtggacacatctacctgtgggac
aaggtctccgctcgcattgtccagttcatggagggagaccgaggaggagtggtcaactgc
ctggagccccaccctcacctcccaggtctggccaccagtggtctggatcatgacgttaaa
ctgtggtcccccactgccgagaatctcacagggctcaagggcctcaaagacgtgatgagg
aagaacaagcgtgagcgtgatgaggacagtgttcgccatggagaccagtacgacacacag
ctcctgtggttcctcatgaggcacatgagaaacagacggccccagaggacacgtcgcgag
ggtgcagagggagacactgatgaatcgtggagctctccagattcctctgatgaagaggac
ggagggccagaccacgtccagtgcatgtcctcttga
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