Salvelinus namaycush (lake trout): 120020214
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Entry
120020214 CDS
T07522
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C-like isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120020214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120020214
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
hnRNP proteins
120020214
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CDC27
PPP4R2
UPF0688
Motif
Other DBs
NCBI-GeneID:
120020214
NCBI-ProteinID:
XP_038819661
UniProt:
A0A8U0TL57
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All DBs
Position
Sna25:10460647..10485107
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AA seq
309 aa
AA seq
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MDLSPTTSSLMASNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEEIFSKYGKIVGCSVHK
GFAFVQFANERCARAAVGAEDGRMIVGQVLDINLAGEPKPHRSKTAKRSAGDMYRSDSIS
PTFDLDYDFQRDYYDRVYSYPSRVPPPPPPLSRAVIPSKRPRVSMTGGGSRRTKASFSSS
SKSSQRASSRTMKTDDLQTIKKELTMIKHKVDYLLESLDRMEKDHSKKSDEKGAKPEPGE
VSSQQHCSNKEESIKREREDLNDSEEGDLLEEEEVKSQQREEEEDDEEEEGEHVDGDDDG
DSVNGDEDS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtcccccaccaccagcagcctgatggccagcaacgtgaccaacaagacggac
ccgcgctcgctcaactcgcgggtctttatcgggaacctcaacacactcctggtcaccaag
gcagacgtggaggaaatcttcagcaagtatggcaagatcgtgggctgttctgtgcacaag
ggctttgccttcgtccagttcgccaacgagagatgtgcccgggccgctgtaggggccgag
gatggacgcatgatcgtgggacaggtgctggacattaacttggctggagaacccaaaccc
cacaggtcaaagaccgcaaagcgctcggcgggagacatgtacaggtctgattcaattagt
cccacatttgatctggactatgacttccagagagattactatgaccgagtgtactcgtac
ccatcccgtgtgccccctcctcctccacccttgtcccgagcagtgatcccgtccaagcgc
ccgcgggtcagcatgactggagggggcagccgccgcaccaaggccagtttctcctcttcc
tccaagagcagccagagggcatcctcaagaacaatgaaaacagatgacctgcagaccatc
aagaaggagctgacaatgattaaacacaaagtagactacctgctggagagcctagaccgc
atggagaaggaccacagcaagaagtcagatgagaagggtgcaaagcctgagcctggagag
gtttcctcacagcagcactgcagcaacaaggaggagagcatcaagagggagagggaggat
ctcaacgactctgaggagggggatctgctagaagaggaggaggtgaagagtcaacaaaga
gaggaggaggaggatgatgaagaggaggaaggagagcatgtggatggagacgacgatggt
gacagtgtcaacggagatgaggactcttag
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