KEGG   Salvelinus namaycush (lake trout): 120020219
Entry
120020219         CDS       T07522                                 
Symbol
ncstn
Name
(RefSeq) nicastrin isoform X1
  KO
K06171  nicastrin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    120020219 (ncstn)
SSDB
Motif
Pfam: Nicastrin Ncstrn_small
Other DBs
NCBI-GeneID: 120020219
NCBI-ProteinID: XP_038819668
UniProt: A0A8U0P829
LinkDB
Position
Sna25:10733413..10748871
AA seq 709 aa
MGLESSKWAIIFLVCWLYKNVSCNSVEQKIYVELNNTVPCVRLLNATHQIGCQSSISGDT
GVIHVLESEADLEWPLSKGPNPPYMVLLESSLFTRSIMMKMKNESNRVAGVAVVVPNTSP
PEFSPHTTCPNENTGVYSDNYGPNLAHCNTTVWNPLGNGLSYEEFDFPVFSLKEDNETEF
IKQCYLDHNRAVNGSAPQYPLCAMQLFSHMHAVTNTPTCMRRNDINFSINPEMVCDPLGD
YNVWGSIRPYNDTVLGHKENESVVIAAARLDSRAFFWEVSTGAEGSISGFVTLLAAAQAL
REVTHKAPPTRNILFAFFQGVSSFCLPKQVSLETFDYIGSSRMVYDMENGKFVIDLDNVH
SILEIGQVAVHSGTNLFLHSDPVSRSNDTVNDEVENFVKNLQSSTAGLSFLLVEPNVSQP
LPPSSLQRFLRAQPIPGIVLADHESAFNNRYYESFYDNAANLNLTYPSDLSPEEQLEFVT
ETAKSLTDVATVVARALYKQAGGDDSQVNTIKADPKIVTQMLYGFLVSSNNSWFQAVMAP
ELKNILKPSPPEYYVGVVMSSTPTRLVQYLLANLTGAATNLTQSQCQKPDELPNESRQMY
SYLWVQGIVPPNSTQRDSFCVRASVRLTKAVSPAFELGEYASKDYSTWTESRWKFIKARI
FLVASRDLEMLTLGVGVAVLFTSLLVTYFISTKADVLFSSTREPASAAY
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgggtttggaatcgtcgaaatgggctataatattcttagtttgttggctttacaaaaat
gtgagctgtaactctgttgagcagaagatttatgtggagctgaataacactgtaccatgc
gttcgactgctcaatgctacacatcagattggctgccagtcctcgatatcaggtgataca
ggtgtgatccatgtcttggagtctgaggcagatctcgaatggcctttgagcaaaggaccc
aatcctccttatatggttctgttggaatcatccctcttcaccaggtccatcatgatgaag
atgaagaatgaatccaatagggtagctggggttgcagtggtggtcccaaatactagccca
ccagagttctcgccacacacgacatgtcccaatgagaacacaggtgtatactctgacaac
tatggtcctaatttggcacactgtaacactactgtatggaaccctctggggaacggtcta
tcctatgaggaatttgacttccctgtcttctccctgaaagaagacaacgaaacagagttc
atcaaacagtgctacttggaccataatcgcgcagtgaacggcagtgccccgcagtaccct
ttgtgtgccatgcagctcttctcccacatgcacgcagtcaccaatactccaacctgcatg
agacgcaacgacatcaactttagcatcaacccagagatggtgtgtgaccctctgggtgat
tataatgtttggggttccattcggccctataacgacaccgtcttgggccacaaggagaac
gagagcgttgttatagcagcagccaggctggacagcagggcatttttctgggaggtttca
actggagcagagggaagtatctccgggtttgtcactctgcttgctgctgcccaggcactg
cgtgaagtcactcacaaggcccctcccacacggaatatcctctttgccttcttccaaggg
gtcagttccttctgtctccctaagcaagtcagtctagaaacctttgactacattggcagc
tctcggatggtttacgacatggagaacggcaagtttgtgatagacctggacaatgttcac
tcaatactagagattggtcaggtggccgtgcacagtggcaccaacctctttctccactca
gaccctgtgtccaggagtaacgacactgtcaatgacgaggttgagaattttgtgaaaaat
ttacagtcctccacggctgggctcagcttcttattggttgagcctaatgtctctcagcca
ctcccaccctcctccctccagcgtttcctgcgagctcagccaatcccagggattgtgctt
gcagaccacgaatccgctttcaacaacaggtactatgagagtttttacgacaatgctgct
aacctgaacctgacctatccatctgacttgagtccagaggaacagctggagtttgtgact
gaaactgcaaagtcccttactgacgtggctacggtggttgcacgtgctctctacaagcag
gccgggggagacgattcccaagtcaacaccatcaaggcagaccccaaaatagttacccag
atgctgtatgggtttctggttagttccaacaacagttggttccaggcagtgatggcccca
gaactaaagaacattctcaagcccagcccaccagagtactatgttggtgttgtcatgtct
tccactccaactcgtctggtccagtacctcctggccaatttaactggagcagccaccaac
ctcacccagagtcagtgccagaagccagatgagctgccgaacgagagcagacagatgtac
tcctatctctgggttcagggcattgtcccacccaacagcacccagagggattctttctgc
gtacgtgcatcggtacgcctgaccaaagcagtgtcccctgccttcgagctgggagagtat
gcttctaaagactattccacgtggacagaatcacggtggaagttcatcaaagctcgaatt
ttcctagtagcgagccgggacttggagatgctgaccttaggcgtgggagtggctgtgttg
ttcacatccctactggtgacatacttcatcagcaccaaggcagacgtcctcttcagctcc
acgagggaacccgctagcgccgcctattga

DBGET integrated database retrieval system