Salvelinus namaycush (lake trout): 120020310
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Entry
120020310 CDS
T07522
Name
(RefSeq) protein SSXT-like isoform X1
KO
K15623
protein SSXT
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120020310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120020310
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120020310
GBAF(ncBAF) complex
120020310
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
120020310
NCBI-ProteinID:
XP_038819808
UniProt:
A0A8U0P716
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Position
Sna25:17330204..17354170
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AA seq
403 aa
AA seq
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MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGAPGPQPPHGHNMPSEGMVSGGPTAPH
MQNQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGAMNMPPSSHGSMGGYNHAVPSSQGMP
AQGQMNMPQGQGPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGGGQHYQGQQNPM
GMMGQVNPGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEERDPAANQ
QSPYEKDHGNAQYGQQQEAYQQGPPQQQGYPPQQQYPGQQGYPGQQQGYGPSQGAPGQYP
QGYPQGQGQQYGAYRGPQPGPPQAQQQRPYPGYDQGQYGNYQQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacagacaacgtggaaagggtgatataacacccgctgga
attcaaaagttactggatgagaacaatcagctgattcaatgtataatggatttccagagc
aaaggaaagaccgcagaatgttcacagtaccaacaaatgctccacagaaatttggtttac
ctggccacgatagcagactccaatcagaacatgcagtctctgctccctgctccacccact
cagaacatgcccatgggccctggtgggatgaatcagagtggagcgcctggcccccagccc
ccccacggacacaacatgccctcggagggcatggtcagcggcggccccactgccccacac
atgcagaaccagatgaacggacagatgcctgggcccaatcacatgcccatgcagggcccc
gggcctggccccaaccagcctcccaacatgcccggcagtggcgccatgaacatgcccccc
agcagccacggctccatgggcggctacaaccacgctgtgccctcgtctcagggcatgcct
gcccagggccagatgaacatgccccagggacagggacccatgggcaactacggcccccgg
cccaacatgaacatgcagcctaaccaaggccccatgatgcaccagcagcctccctcccag
cagtacaacatgccccctgggggtggtgggcagcactaccagggccagcagaatcccatg
ggcatgatgggtcaggtcaacccaggcaaccatgtcatggggcagaggcccatgccccct
tacagacccccacagcaaggaccccctcagcagtacccagggcaggaagactactatggg
gaccagtacagtcacgcaggacagggagcttcagaagagcgagacccagcagccaaccaa
cagtccccctatgaaaaagatcatggaaatgcccagtatggccagcagcaggaggcctac
cagcaaggtcctcctcaacagcagggctaccccccacagcagcagtaccccggacagcag
ggctatcctggacagcaacagggttatggtccatcccagggagctccaggccagtacccc
cagggttacccccagggccaggggcagcagtacggggcctaccggggcccccagcccggc
ccccctcaggcccagcaacaacgcccatacccaggctacgaccagggtcaatatggaaat
taccagcaatga
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