Salvelinus namaycush (lake trout): 120020315
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Entry
120020315 CDS
T07522
Name
(RefSeq) oxysterol-binding protein-related protein 1-like
KO
K20174
oxysterol-binding protein-related protein 1/2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120020315
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120020315
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
120020315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
Ank
Ank_2
Ank_4
Ank_3
Ank_5
PH
Motif
Other DBs
NCBI-GeneID:
120020315
NCBI-ProteinID:
XP_038819817
UniProt:
A0A8U0P8J0
LinkDB
All DBs
Position
Sna25:17642047..17681795
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AA seq
977 aa
AA seq
DB search
MDLSDPEEQLLHYAKTGSLSLIQCLLQLRIEQDLRLNINCRGKTKTSAGWTPLHLACYFG
HKDVVEELLKAGADVNLQNSMGDTPLHKAALTGRKEVVLLLLRYDASSTIINGKAQIPKA
VTEDDEINTMLEAAERRAERRQEEKLLEAAREGDIFSLSELLSRKRPPDIDCRDLQGNTP
LHCAAYRGQKQCVGKLLKCGASSSMKNKSDQTVFDLACSEEIKQILEGSRDKDTVSGVQK
FEGLLWKSSRFLAWRSHWVVIQDGVLSWYPRQADAVADVRKQGAKALMKAHCRVKAWDKC
FFSLRCFDHSLHHFKVSSKTDPEAIRKRWLDALEEHTAYSSCNTTQEQTTEDEEGDEDTL
GDLTDSLQAAEACQQKLETQVSIFLSMVKNEENNTLATPLLLKARETSDLSRETSSALHF
CLGLFSKQQEVWSLKLEQEVEKNKLLSEALQTLATEHQELDQQSLCKGRRSSTLSTLTED
DFYDALSESDDEHSLSLSGFLSVAGHSCEEEEEEGEVKEEEREPSLFSSSTLRGPAAACD
MSGEVNHGDKTAQCNGVKKHRTSLPAPMFSRNDVSIWSILKKCIGMELSKIAMPVIFNEP
LSFLQRLTEYMEHTYLIHQANAATDSMERMKCVAAFAVSAVASQWERTGKPFNPLLGETY
ELIREDLGFRWMSEQVSHHPPVSAFHAEGLQEDFLFHGSIYPKLKFWGKSVEAEPKGIIT
LELPKYNEAYTWTNPTCCVHNIIVGQLWIEQYGNVEVINHKTGERCSLTFKPCGMFGKEL
HKVEGYILDKSKKKLCAIYGKWTECLYTVDAATFDAHKKSDKKNSEEKKSNKQTSVDEEP
EEMPLPDGDTVQVIPGSELIWRIAPRPDNSAEFYAFSTFAMQLNELEEGMKGVLPPTDCR
LRPDIRAMEKGDIDLASAEKKRVEEKQRLARKNRSKSTEEWKTRWFHQGSNPHIKAQDWL
YSNGYWERNYSLLPDIY
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggacctgtcagaccccgaagagcagttactccactatgccaagactggaagcctctct
ctcatccagtgtcttctgcagctacggattgagcaagatctcagactcaacatcaattgc
agaggaaagaccaagaccagtgcaggttggacacctctacatctggcctgctactttgga
cacaaagatgttgtggaggagttgctcaaggctggtgctgatgtgaatttgcagaatagc
atgggcgacacgcctctacacaaagctgccttaacaggaagaaaggaggtagttctgttg
ctgctgcgatatgatgccagttccactatcatcaatgggaaagcacagatccctaaagct
gtcactgaggatgatgaaatcaacaccatgctggaggctgcagagagaagagctgagagg
agacaggaggagaaacttctggaggcggccagagagggagacatcttcagcctgtctgag
ctgctcagcaggaagcggccccctgacatcgattgtagagacctgcaggggaacacgcct
ttacactgtgctgcctacagggggcagaagcagtgtgttggaaagctgctcaagtgtgga
gctagctccagcatgaagaacaagagtgaccaaacagtgtttgacctggcctgcagtgag
gagattaagcagattctggagggcagtcgtgacaaggatacagttagtggtgtgcagaag
tttgaaggcctcctatggaagagttccaggttcctggcatggcgttcccattgggtggtc
attcaagatggggtcctgtcctggtaccctagacaagctgatgctgtggcggatgtccgg
aagcaaggcgcgaaggctctgatgaaagctcactgcagggtaaaagcatgggacaagtgc
ttcttcagcctccggtgctttgatcacagtctccatcactttaaggtgtcatctaagaca
gatccagaggctatcagaaaaagatggctggatgccctggaggagcatacggcctacagc
agctgtaacactacccaggagcagaccactgaggatgaggagggggatgaagatacattg
ggggacctaacagactccctccaggctgctgaagcctgccagcagaaattggagactcaa
gtgtctatttttctgtccatggtgaagaatgaggagaacaacacattggctactcctctc
ctgctgaaggccagggagaccagtgacctctccagggagaccagctctgccctacacttc
tgtctgggcctgttttccaaacaacaggaggtgtggagcctgaagttggagcaggaagta
gagaagaacaagctgctatcagaggctctccagaccttagctacagagcaccaggaacta
gaccagcagtccctctgtaaaggcaggaggtcctccacgctaagcacactcacagaggat
gacttctatgatgccctgtccgagtccgacgacgagcattctctctctctgagcggcttc
ctgtctgtggccggacactcgtgtgaagaggaggaggaagaaggggaggtgaaggaagag
gagagagagccctctctgttcagcagcagcaccctcaggggacccgccgccgcctgcgac
atgtctggggaggttaaccatggcgacaagacggcccaatgcaacggagtcaagaagcac
agaacgtctttaccggcacccatgttctccaggaatgacgtcagcatctggagcatcctg
aagaaatgcatcggcatggagctgtctaagatagccatgccagtaatcttcaacgagccc
ctgagttttcttcagcggctgacagagtacatggagcacacgtatctcatccaccaggct
aacgctgccacagactccatggagaggatgaagtgtgtggcagcatttgctgtgtctgct
gtagcatcacagtgggagaggactggaaaacccttcaatccacttctaggagaaacctat
gagctgatcagagaggacctagggttcaggtggatgtcggagcaggtgagccaccaccca
cctgtaagcgccttccacgccgagggcctgcaggaggacttcctgttccacggctccatc
taccccaaactcaagttctggggaaagagtgtggaggcagagcctaaaggcatcatcacc
ctggagctgcccaaatataatgaagcgtacacctggacaaaccccacctgctgtgtccac
aacatcatcgtgggccagctgtggatcgagcagtatggcaatgtggaagtgatcaaccac
aagaccggcgagagatgcagcctgacgttcaaaccatgtggtatgtttggcaaggagctg
cacaaagtggagggctatattctggacaaaagcaaaaagaagctctgtgccatatacggt
aaatggactgagtgcttatacactgtggacgccgccacctttgatgctcacaagaaatct
gacaagaagaactcagaggagaagaaaagcaacaagcagaccagtgtagacgaagagcca
gaggagatgcccctgcctgatggagacacggtccaggtcatcccaggaagtgagctcatc
tggaggatagccccccgaccagacaactctgcagagttctacgccttctccacgtttgcc
atgcagctgaatgagctggaggagggcatgaagggggtcctgccccccacagactgtcga
ctcagacctgacatcagagccatggagaaaggagacatagatttggcaagtgcagagaag
aagagggtagaggagaaacaaagactggcccggaaaaatcgctccaaatcaacagaggaa
tggaaaacaaggtggttccaccaaggctccaacccccacatcaaagctcaggactggctc
tactccaatggctactgggaacggaactactccctgctgcctgatatttactga
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