Salvelinus namaycush (lake trout): 120020320
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Entry
120020320 CDS
T07522
Name
(RefSeq) rho GTPase-activating protein 21-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120020320
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Others
Others
120020320
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120020320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120020320
NCBI-ProteinID:
XP_038819823
UniProt:
A0A8U0P725
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All DBs
Position
Sna25:complement(18503693..18616420)
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AA seq
1861 aa
AA seq
DB search
MMASRWKGPFDEEERLTRPSLCKNDVPEWGDSPAGLFNLQGEEEPFSWPGPKTIHLRRTS
QGFGFTLRHFIVYPPESAVHPYPFPEEEHGRRGRQRHRLEPMDTIFVKQVKVGGPADGAG
LCTGDRIVKVNEASIIGKTYSQVIALIQNSDAFLELCVMPRDEDILQLAYSQDAYLRGRS
AYSGIARHIPEPPPICYPRVDCKPPGMAQATETPSPMGVQGACRGPVAASPPDLGYRIEI
PVPPSPPPPAHPYSKSQTVACMRNNSVRTVVVPPELGRMGPAHRVEYGLVGPSDPGIIRG
RPGSVSHYPLPRKTDIYPSGASRLNYGAPPPHYPPNSNSPNPGSHQNIDWRTYQTYREYI
DNKGIHAYGSRTIQERLGSLRAASQNTFNSSHYIPRGGWGPDPKGLRRRSTSHDRAYHGP
PPPFHHMPPRSSSQDRMSVAERGVHPRNWPPRSVSQDEFTHKARARSSDYVDPADLGRPM
VDRRGYGSRVDQGTCPSRQSLSKQAAHHRPPAGYGRDSLRVGPMSNPALHTNGPEQHQPH
SAPNMPQDRPSHLGKNLSLEQSNTDERAGVKGVNHVSQSRGPAETMQPPGEVPWRPVAAV
VGHRSSSLSAPHQRPQRPGIFKTSCQHPRPEPQVNGRGPSASESGVVLREKPPGSGKNPS
PLRHPSYILAVNEDDGSEPAAGAVCWLPNDARREMHMRRLSEKQEKHQTCSSNLDESLDS
IPFIDEPASPSVDHEATSIPASAVISVAPAITTVPPSPSSSPYPLMRRQLSHDQESLRNA
ILESDAETKQERSKSCDEGLDNYREEGRGRSNSKHMPSLRGLRKALDGHKSSDDSGSRRD
SSSDVFSDSSKEGWLNFRQINTEKSKRGGSRSWKQMYAVLRGHGLTLYKDKKDGVSHASS
HSQSDDDPQPISVKACLIDISYSDTKRKNVLRLTTSDCEYLFQAEGRDDMLSWIRVIQEN
SNLDDENAGITSQDLISRKIREYNTMMSAPSSKTEPSPKTSRQSLSIRHTLLGVKGEGKG
QSPHSPKTGERDESSPPRDKAAWRRGIPGIMRKPFEKKSTAGVTFGVRLDDCPPAQTNRF
VPLIVDVCCKLVEERGLEYTGIYRVPGNNAAISSMQEELDSKGLMSDIDIQEDKWKDLNV
ISSLLKSFFRKLPEPLFTNEKYADFIEANRTEESVERLKELKRLILELPDHHYETLKFLS
GHLKLVSENCEKNKMEPRNLAIVFGPTLVRTSEDNMTNMVNHMPDQCKIVENLIQQYDWF
FTEEGDDDPVTSLEQESTVQSQPVPNIDHLLSNIGRTTTTSSPGEVSDSTCSDSSKSKQG
LWGSGKDQCSREMLLSSFFVSRKRKKPKDKTQPSSSDDDLDAVFDKEEEPEPSHQALHPA
WSPESQTEEEEERDVEDVSERGVQPGDRFQTNGKESRSDSLMSQPSPKHTPSFRTSSTCS
PYASPSPSRSPRLGYRSQVAHQSSLSDPPSNYDEVSDLGTMDSTSSQASVTGPRVRHGRT
GGLGPETGASSLGAEVSSITSDYSTTSSMTFLTGAELSTLSPEVCSVAESRGGDDADDER
SELISEGRPMETDSESDLSVFVGGGKEAGPVEKIYLSDVPDAPRPLPSHRLIECDTLSRK
KSAARQKTDSESSLDGGRSDKDSTRLSCVPGAVKVRSTDSLSSSSRSESEVGAEPAWRLK
ITDRLKFRLRTSVDDMFGVGTQRSRSPEGRREKKKNIRRRHTMGGQRDFAELSVMGNWQE
GGGSRAELSAVDRLKPKCSSQDFSIREWIARERHRTSNPEVSLDFTEHQGAPLLFRSPDP
NQAQEAPSSSLSEPLSPRPAPAELLNGDAGPQNKSLSLSATAHPHKLSGAQVVHSRFYQY
L
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtcacgttggaaaggtccattcgatgaagaggagagactgaccagaccctct
ttgtgcaagaatgacgtgccagagtggggtgattcccctgcaggcctgttcaacctgcag
ggagaggaggagcccttttcgtggccgggtcccaagactatccatctgcggcgcacctct
cagggcttcggcttcaccctgcgccacttcattgtctacccaccagagtctgcagtgcac
ccttaccccttcccagaggaagagcatggacgcagagggagacaacggcacaggctggag
ccaatggacaccatctttgtgaagcaagtgaaggtgggtggtcctgccgacggcgctgga
ctctgcacaggagaccggatagtaaaggtaaatgaagcaagtatcattgggaaaacgtac
tctcaggtcatagccttgatccaaaacagtgatgcctttcttgaactctgtgtgatgcca
agagatgaagacatactgcagctggcctactcccaggatgcgtacctccgaggtcgtagt
gcctacagtggaattgcccgtcacatccccgaaccgccccccatatgttaccccagagta
gactgtaagcccccggggatggcccaggctacagagaccccctctccgatgggggtacag
ggagcatgccgggggcctgtggcggcatcaccacccgacctggggtaccgcatagagatc
cccgtgcccccgtcccctcctcctcctgcacacccgtactccaaatcccagactgtggca
tgcatgcgcaacaacagcgtgaggactgtggtagttcctccagaactgggccgtatggga
ccagctcatagagtagagtacggcctggtagggccctctgaccctggcatcatcagaggg
cgacctgggtctgtgtcccactaccccctgccacggaaaacagacatctacccctctggt
gcgagccgcctcaattatggtgccccaccaccccactacccacccaactcaaactccccc
aaccccggctctcaccaaaacatcgactggcggacgtaccagacgtacagggagtacatc
gacaacaagggtatccatgcatacggcagccgtaccatccaggagagactaggcagcctg
cgagccgccagtcagaacaccttcaactcctcccactacatcccccgagggggttggggg
cccgaccccaagggcctccgacgcaggagcacctcccacgaccgcgcctaccacggaccc
ccgccccctttccaccacatgccccctcgcagctcttcccaggaccgtatgagtgtggcg
gagcggggggtccaccccaggaactggccccctcgtagcgtgtcccaggatgagtttacc
cacaaggcccgggcccgctcctctgactatgtggaccctgcggatctgggccgtcccatg
gtggacagacggggctacggtagcagggtggaccagggtacatgtccaagcaggcagagc
ctctccaaacaggctgcccatcatcgacctcctgcaggatacggtagggacagtctccgg
gtggggccaatgtctaaccctgccctccacactaatggaccagagcagcaccagcctcac
agtgcccctaacatgccccaagacagaccctctcatctggggaagaatctcagcttggag
caatccaacactgatgaaagagctggtgtcaaaggtgtgaaccatgtgagccagagtagg
ggaccggcagagaccatgcagccaccaggggaggtgccatggagaccggtggcagcggtg
gttggccataggtcctcttccctctccgctccccatcagagaccgcagaggcctgggatt
ttcaaaacctcttgccagcaccctcgcccagagccccaagtgaacgggcgtggcccctca
gcctctgagtcgggcgtggtgctcagggagaagcctcctgggtcggggaagaatcccagt
cccctacgccacccttcctacatcctggcggtgaacgaggacgacggctcggaaccggca
gcgggtgcggtgtgctggctgcccaacgatgcgcggcgggagatgcacatgcggcggctg
agcgagaagcaggaaaagcaccagacctgctcctccaacctggacgagtccctcgactcc
atccccttcatcgatgagccggctagccctagtgttgaccatgaggccacgtccattcct
gcttccgccgtgatatctgtcgctccagccataactacagtcccccctagcccaagctcc
tccccgtaccctctcatgcgccgacagctgtcacatgaccaagagtctctcagaaatgct
attctggagtctgatgccgagaccaaacaagagcggtccaaatcctgcgacgagggtctg
gataactacagagaggaaggcagaggccggtcaaacagtaaacacatgcccagtctgaga
ggcctgaggaaggctctggatggacacaagtcatctgatgactctgggtccagaagggac
tcctcttcagatgtattcagtgactcttctaaagaaggctggctcaacttcaggcagatc
aacactgagaagagcaagcgtgggggttcgaggtcgtggaagcagatgtacgccgtcctg
cgaggccacggcctcacgctttacaaggacaagaaggacggcgtctcccacgcctcctcc
cactcccagtccgacgacgacccacagccaatcagtgtcaaggcctgcctgattgacatc
tcctacagcgacacgaaacggaagaacgtgctgcgtctgaccacgtcagactgcgagtat
ctgttccaggctgagggcagggatgacatgctgtcatggatccgagtcatccaggagaat
agtaatctggatgatgagaatgctggtataaccagccaggacctgatcagcagaaagatc
agagagtacaacaccatgatgagtgcccccagcagcaagactgagccctcccccaaaacc
tcccggcagtccctcagtatcagacacaccctcctgggggtgaagggagagggcaagggc
cagagcccccactcacccaaaacaggagagagagatgaatccagtcctccacgggataag
gctgcctggaggaggggcatccccggcatcatgaggaaaccctttgagaagaagagcact
gctggggtaacttttggggtgcgcctcgatgactgcccacctgcacagaccaacaggttt
gttcccctcatcgtggatgtgtgctgtaagctggtagaggaacgagggctagagtacact
gggatctacagagtaccaggaaacaacgctgccatctccagcatgcaggaggagctggac
agtaaaggactgatgagtgacatcgacatccaagaagacaaatggaaggacctcaacgtg
atcagtagtttactgaaatccttcttccggaaacttccagagccccttttcacaaatgaa
aaatatgcagattttattgaagccaatcgaacagaagagtcagtggagaggttaaaagaa
ctcaagaggctgattcttgaattgcctgatcatcactatgaaaccctcaaatttctctct
ggacacctcaagttggtctctgaaaactgtgagaaaaataagatggagcctcgtaacctg
gccatcgtgtttggtccaaccctggtcagaacctctgaggacaacatgaccaacatggtc
aaccacatgccagaccagtgcaagatagtggagaacctcattcagcagtacgactggttc
ttcactgaggagggggacgatgaccctgttacctcattggaacaagagagtacagtgcag
tctcagcctgtgcccaacatcgaccacctgctgtccaacatcggccggaccacaaccacc
tcctcgcctggggaagtctcagattcaacgtgtagtgactcctccaaatcaaagcagggc
ttgtgggggtctgggaaggaccagtgtagcagggagatgctgctctcctctttctttgtc
agccgcaagcgtaagaagcccaaggacaagactcagcccagcagctctgacgacgacctg
gatgccgtgttcgataaggaggaggagccagagccgagccaccaggccctccaccctgcc
tggtccccagagagccagacagaggaggaggaggagagggatgtcgaggacgtcagcgaa
agaggggtacagccaggggacaggttccaaaccaacgggaaagagtcccgttcagacagc
ctcatgtctcagccctctcccaaacacacccccagcttccgtacctcctccacctgctcc
ccctatgcgtcaccctccccctcccggtcccccagacttggctaccgcagccaggtggca
caccagtcgtccctgtcggaccctccctccaactacgacgaggtctcagacctaggtacc
atggacagcaccagctcccaggcatctgtcacaggtcccagggtgaggcatggcaggacg
gggggcttggggccagagactggggccagcagcctaggggcagaggtcagctccatcacc
tcagactactccaccacctcctccatgaccttcctgacaggggccgagctgagcacgctc
agtccagaggtttgctcggtggccgagagcaggggaggagacgacgctgatgatgagcgt
agtgagctgattagtgagggccggcccatggagacggatagtgagagtgacctatcagtg
tttgttgggggtgggaaagaagcagggccggtggagaagatctacctatcagatgtgccg
gatgcccccaggcccctcccctcccacagactcattgaatgtgacactctctcccggaag
aagtcagcagcgcggcagaagactgacagtgagtcctcattggacggagggcggagcgac
aaggactccactaggctgtcttgcgttccgggggcagttaaggtccgttccactgacagc
cttagctcctcctcccgcagcgagtcagaggtgggggctgagcctgcgtggcgtctcaag
atcacagaccggctgaagttccgcctgcggacgtcggtagacgacatgttcggggtgggt
acccagcggagccgctctccagagggacgcagggaaaagaagaagaacatcagacgcaga
cacaccatgggaggccagagggactttgctgaactgtctgtgatgggcaactggcaggag
ggcgggggctcgcgggcagagctgtcggccgtggaccggctgaagccaaagtgttcttcc
caggacttctccatccgggagtggattgcccgcgagcgccaccgcacctccaaccccgag
gtcagcctggacttcactgaacaccagggtgcgccgctcctcttccgcagccctgacccc
aaccaggcccaggaggccccgtcgtcgtccctctcagaacccctctcaccacgcccggct
ccagctgagctgctgaacggagacgcaggcccccagaataaaagcctgagcctgtcggcc
accgcacacccacacaaactctctggcgcccaggtggtccactctcgcttctaccagtac
ctgtga
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