Salvelinus namaycush (lake trout): 120020328
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Entry
120020328 CDS
T07522
Name
(RefSeq) zinc finger CCHC domain-containing protein 2-like
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
120020328
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GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
120020328
NCBI-ProteinID:
XP_038819834
UniProt:
A0A8U0TK98
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Position
Sna25:19693435..19714498
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AA seq
1061 aa
AA seq
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MLKINLPMRTAEEEYHTVEDEQENTDYNSLTIDSIPYRGVSHRFKDSTRESCRLSQIDKE
TVFEWFGLHLNPAKRIEFMYGILHMCQPLELRFFGSCLEDLARKDFHVFRDFEIRANSQT
DLGLLMDVADPVVRAKLLVCLSLLRSENRECAGTLYRALNHMDPALYLNTYHGVPVSPRG
STQNVPDQHSPRDGGMKSGRLEHPSGPPLEAESGSLEHLALLFTMASLHPAFSFHQRDTA
RHQLDNVERTIEERRYCHNRPSVQQKQHTLRKEDLSLRSTDMGQSACCIPNQLPKRTLSQ
REAVHIDKIELKKIFWIRGNREYSIEVQWSDSTWSTVTKTHHELYDFLSKLPCERSSEPF
EKGLVRLLAQRDQYEPRDLERTLQDMLLSAPAAFRQRREVCRFLVPCLSLQGDNTITLGK
TCKAAEHFKEDCTEPSSQDEDLESHHLGHQTECSSLGQSIQMTKSSRSESQRPAVHLEHN
GVVEGRGKADVMSCWPDPHQKVDEKWAFTPELKSRRRPDEVRRSEGAKAYIPNGIIRPLS
TNVIRQGISEKPVQDRYGDTWSESSSTPSSPQHEARESLESEDLEDLEEERDTTESYCSV
QQKRASGHSRGKVVATVHPMVPVPHKEEPSYTDSPRSVHPLPLTVQNGPTMPDVMAFVTS
QPGDGSPAEGVLTGTTPMVPQESIPSQASLGDPERQRHVSVSAPLNSQPATPGSSSHPIL
QCYKTHTSPDSRSTNPQHQPHMGAIGVIPPTSHMSPLQQTYITTDSASTATLPRAASLPD
PNTRPQALAVPTSLPTPNYVTPSSGATVTPAAISQVQATLLPAVPTHTPGPVSSQALTLT
HSTAQGDGTSSCSSSGVAAGQTQQKLQPQQQAQPAQQQQMSCNTCGCRGSCGSSHSPNAN
FYFPPQLGRQVFSATHLPLFHLSSMCSTGYPSHRSQVQHQSNGTTQLPFYPPPPHTATPT
QYVSGPLLHTSHSDHMLATQAGYNLQQMAAASFNRFYTPMFSSVGLGTGMKKSSANVSCY
NCGLSGHYAQDCKQPSMDAGQQGGFRLKYAAPHSSEADKTD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaattaacctgcccatgcgaacggcggaggaagaataccataccgtcgaagac
gagcaggaaaataccgattacaacagtctcactattgattcgattccgtaccgtggtgtg
agccaccggttcaaggattcaacgagggaatcgtgtcgcctgtcgcaaattgacaaggag
acggtgtttgagtggttcggcttgcacctcaacccagcaaagcggatagagtttatgtac
ggaatacttcatatgtgtcaaccacttgagcttcgctttttcggatcctgcctcgaggac
cttgcacggaaagatttccacgtcttccgagactttgagataagggcgaacagtcaaact
gacttgggcctccttatggacgtcgccgaccctgtcgttcgtgccaaactacttgtctgc
ctgtcacttttgagatctgaaaacagagaatgcgcgggcacactttatcgtgctttgaac
catatggatccagcgctgtacttgaatacttatcatggcgttccagtatctccacgtggg
agcactcagaatgtacctgatcaacattcccctcgcgatggtggaatgaagtccgggaga
ttggagcatcccagtgggcctccactggaggcagagtcgggttccctggagcacttggcg
ctgcttttcaccatggcctcgctgcacccggcgttctcttttcaccagagggatactgcc
aggcaccagttggacaatgtggaacggaccatagaggagagaaggtattgccacaaccgc
ccgagcgtccagcagaagcaacataccctgcgaaaggaggacctcagcctcaggagcact
gacatgggtcagtcggcctgctgtatccccaatcagctccccaaaaggaccttatctcag
agagaagcagttcacattgacaagattgagctaaagaagatcttttggatccgaggaaac
agggaatacagtattgaggtccagtggtctgactcaacgtggagcacagtgaccaagact
caccatgagctgtatgactttctgtccaagcttccatgtgagaggtcctctgagcccttt
gagaagggactggtgaggttactggcccagagagaccagtatgaacccagggacctggag
aggacgctacaggacatgcttctgtcagccccagcagccttcaggcagagaagagaggtc
tgcaggttccttgtcccatgcctcagcctccagggagataatacaataactctgggaaag
acctgcaaggcagccgagcactttaaagaagactgcacagagccatctagtcaggacgaa
gacttagagtctcaccaccttgggcatcagacggagtgcagcagcttaggccagagcata
cagatgacaaagagcagccggagtgagagccagaggcctgctgtccacttagagcacaac
ggagtggtggaggggaggggaaaagcagacgttatgtcctgttggccagacccacatcag
aaggtagatgagaaatgggctttcactccagaactaaagagtagaagaagacctgatgaa
gttaggagaagtgagggggccaaagcctacatccccaacggcatcatcagaccgctgtca
acaaacgtgattagacagggtatcagtgagaagccagtccaggacaggtatggagacacg
tggtctgagagctccagtaccccctccagcccccagcatgaggcccgtgagagtctggag
agtgaggaccttgaagacctggaggaagagagagacactactgagagttactgttctgtc
cagcagaagagggcgagtggtcacagcagggggaaagttgtggctactgtacaccctatg
gtccctgtaccccacaaggaagagccatcctacactgacagtccccgaagtgtacatcct
ctaccactgacggtccagaatgggcccaccatgccagacgttatggcctttgtcacttca
cagccgggggacggttcaccagcagagggggtactgactgggaccacccccatggttcct
caggagtccatcccaagccaagcttccctgggagaccctgagagacagaggcatgtgtct
gtgtctgcacccctgaactcacagccagccaccccaggctccagcagtcaccccatactc
cagtgttataaaacccacactagcccagacagtagaagcactaacccccagcaccagccc
cacatgggtgcaatcggtgtcatccccccgacctcccacatgtcccccctgcagcaaaca
tacatcaccactgactcagcctccactgccaccctaccccgagcagcctctctccctgac
cctaacaccaggcctcaagccctggctgtacccaccagcctacccacccctaactacgtg
acaccctcctcaggggcaactgtgaccccagctgccatcagtcaggttcaggccactctg
ctcccagccgtccccactcacacccccggccccgtgtccagccaagccctgaccctcacc
cacagcacggcccagggagacggcacctcttcttgcagcagctcgggggtggcagcaggg
cagacccagcaaaagctgcaaccccagcagcaggcccaacctgcacagcaacagcagatg
agctgcaacacctgcggttgccgtggcagctgtggtagtagccactcccccaacgccaac
ttctacttccccccccagctggggcgccaggtcttcagcgccacccacctccctctcttc
cacctctcgtccatgtgcagcactggataccccagccaccgcagtcaggtccaacaccag
agcaacggcaccacacagctacccttctatccccctcctcctcacacagccacgccaacg
caatacgtcagtggacccctgctccacacctcccactcagaccacatgctggccacccag
gctggatacaacctgcagcagatggcagctgcttccttcaaccgtttctacacacccatg
ttctcctcggtgggactgggcacgggcatgaagaagagtagtgccaacgtctcctgctat
aactgtgggctcagcgggcactatgcccaggactgcaagcagccctcaatggacgccggg
cagcaaggtggctttcggctgaagtacgcagccccccactcctctgaagcagacaaaact
gactga
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