Salvelinus namaycush (lake trout): 120020374
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Entry
120020374 CDS
T07522
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120020374 (lamc1)
04518 Integrin signaling
120020374 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120020374 (lamc1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Alanine_zipper
CCDC39
DNApol_Exo
Motif
Other DBs
NCBI-GeneID:
120020374
NCBI-ProteinID:
XP_038819902
UniProt:
A0A8U0P7U3
LinkDB
All DBs
Position
25:23940682..24026226
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AA seq
1594 aa
AA seq
DB search
MRWVIQVLFSFTCLAVFSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPHSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKTNRGFIR
TGQDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKNNGFGKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLPCNCNGKSAECYFDPELYRATGHGGHCRNCADYT
DGPNCERCLDNYYRHTSGTRCLPCSCNPVGSLATQCDNTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGYFNMDPQNPQGCTP
CFCFQHSSVCDSAEGYSIDTVSSTFDRDDEQWTGQQRDSSSVSVQWSAGGEISLISDDYF
PIYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNAY
PGENMQTFVFRLHDSTDYPWRPTLTHSEFQKLLHNLTSIKIRGTYSERSAGYLDDVKLIT
ARRGPGSPARWVEKCTCPQGYVGQHCERCALGYRRSRPDLGPFSSCDSCNCNGHSDTCNP
DTGMCDCQHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTNC
PTGTTGKRCELCDDGFFGDPLGENGQVRVCRACKCSDNIDPNAVGNCDRETGECLKCIYN
TDGFFCDRCKEGFYGNPLATNANDKCKACSCSPYGTVDRQTSCLQVTGQCQCFPHVTNRD
CSACQPGFFNLRSGTGCEQCNCNSIGSTNGQCDIGSGQCECQPGVTGQHCERCEVNFFGF
GLSGCKPCDCDPEGSSTAQCKEDGRCACLPGFVGARCDMCEENYFYNRSTPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSTSETVSDKAFEDRLKEAEKSIMDLLDEAQTSKDV
DKGLLERLGKLNSTLTTQWNRLQNIRNTVDNTGTQADKARNRVRDAESLIGRAREELDKA
KDAISKLDIKAPSISGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNLL
TKTLDGEGKTNQDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSLP
PFNTKSLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQTA
DQLLARVDAAKALAEEAAKKGRTTYQEAQDILGNLRDFDKRVNDNKTAAEDAMKRIPEIN
ATIIAANEKTKQAEGALGNAAADAKEAKSKAEEAEKIASAVQKGSAKTKADAEKAFEDTM
MLDGEVNGMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVLN
TINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLAELNDVAKSQEEMITDY
DRQIREIRSDIANLNDIKNTLPDGCFNTPSLERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgggttattcaagttttgttttcatttacttgtttggctgtcttcagccacagt
gctatggatgaatgcactgacgattcgagtcgtcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctccaccagaagaa
tactgcgtacaaaccggggttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcgcagacaacaccacagtgctgtgtacctcaccgattacaacaatcaacaggacaca
acctggtggcaaagtcagactatgttagcgggcatccagtatccacactcaatcaatcta
actcttcatcttggcaaggctttcgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccttac
cagtactacagtggctcctgtgagaagacctaccagaagaccaacaggggcttcatccgc
accggacaggacgaacaacaggccctgtgcacagacgagttcagtgacatctcacccctg
actggaggaaacgtcgccttctccacccttgaaggccggcccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgacagctacagatatcaaagtgaccctgaacagg
ctcaacacattcggagatgaagttttcaatgatcccaaggtcctgaaatcctactactac
gctatctcagactttgcagtgggaggaaggtgcaagtgcaacggccatgcgagtgagtgt
gcgaaaaacaacggtttcggcaagccggtttgcaactgcaagcacaacacggagggcgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggagagctacagccaat
aaccctaacgagtgtctgccgtgcaactgtaatggcaagagtgcagagtgctactttgac
cctgagctctaccgtgccactggccacggaggacactgccgcaactgtgccgactacaca
gacgggcccaactgtgagcgctgcctggacaactactacagacacacatctggcacccgc
tgcctgccctgcagctgcaacccagtaggctctctggccactcagtgtgataacacagga
cgctgcagctgtaaaccaggtgtgatgggggacaagtgtgaccgctgccaacctggcttt
cacacattgaccgaagcaggctgcagaccttgctcctgtaacccttccggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcagctgt
gacaggtgtaagctgggctacttcaacatggacccccagaaccctcagggttgcactccg
tgcttctgcttccagcattcatctgtctgtgacagcgctgaaggctacagcattgacaca
gtctcctccaccttcgaccgagatgatgagcagtggacaggccagcagcgtgacagctcc
agtgtttcagtccagtggtctgctggtggagagatctccctcatctctgatgactacttc
ccaatctactttgtggctccagagaggttcctgggcaatcagctgctgagctatggccag
aatctcaccctgaacttccgggtggacaggagagacacgcgcctctcagccgaggatgtg
gttctggagggggctggtctcagagtggctgtgcctctcattgctcagggaaatgcctat
cctggagagaacatgcagacgtttgtgttcaggctccacgacagcacagactacccctgg
aggcccaccctcactcactcagagttccagaagcttctgcacaatctgacgtccatcaag
atccgtggcacctacagcgagagaagtgctggttaccttgacgatgtgaagctgatcacg
gcgaggagaggtcccgggagcccggctcgctgggtagagaagtgtacctgccctcaaggc
tacgtgggacagcactgtgagaggtgcgccctgggatacaggaggagcagaccagacctg
gggcccttcagttcctgtgactcctgcaactgtaacggacacagtgacacgtgcaacccc
gacacagggatgtgtgactgccaacacaacacagctgggctcagttgtgagaggtgtaaa
gacggctactatggagactccactgtgggcagttccagcgactgcaagccctgcccctgc
cccggaggatccacttgtgctgttgtgcccaagaccaaggaggttgtctgcaccaactgt
cctactggaaccacaggcaagcgctgcgagctgtgtgatgacggtttcttcggagacccc
ctgggggagaacgggcaggtgagggtctgtcgggcctgtaagtgtagcgacaacatcgac
cccaacgctgtgggcaactgtgacagagagaccggggagtgcctcaagtgtatctacaac
acagacggcttcttctgtgaccgctgcaaagagggcttctatggaaaccctctggccacc
aacgccaatgacaagtgcaaagcctgctcctgctctccatatggcacagtggacagacag
accagctgtctacaggtcacaggccagtgccagtgtttcccccacgtcaccaacagggac
tgcagcgcctgtcagcctggcttcttcaacctgcggagcggaacaggctgtgaacaatgc
aactgcaattctattgggtccaccaacggtcagtgtgacatcgggtccggtcagtgtgaa
tgccagcccggcgtcaccggtcagcactgtgaacgatgtgaggtcaacttcttcggattc
ggattgtcaggctgcaaaccgtgcgactgtgacccagagggctcctcgacggcccagtgt
aaagaagatggccgctgtgcgtgccttccaggctttgtgggagccaggtgtgacatgtgt
gaggagaactacttctacaaccgctctactcccggctgccagcagtgtccgtcctgttac
tccctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagactttg
attgacaacctgggctccacatcagagactgtgagtgacaaggcgtttgaggaccgactg
aaggaggcagagaaatccatcatggacctactggacgaggctcagaccagcaaagatgtg
gacaaaggcctgctggaacgcctggggaaactgaacagcacactgaccactcagtggaat
cgtctgcagaacatcaggaacaccgtggacaacaccggaacccaggccgacaaggcccgc
aaccgggtacgagatgctgagagcctgatcggccgcgcccgcgaggaactggacaaggcc
aaggacgccatcagcaaactggacatcaaagcaccctcaatcagtggagatcctaacaac
atgacccttctggcagaggaggctcgcaatctggccgacaaacataaaatggacgcggat
caaattgagaagatcgccaaggatgccaacgacacgtccaccaaggctctcaacctgctg
acaaagactctagatggcgagggcaagaccaaccaagacattgatgagctcaacaggaag
tacaatgaggcaaaggacctggccaagaacctggagaaacaagccaacaaggtgcatgct
gaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgacaagcctgcca
cctttcaacaccaaatcactggaggacgaagcgagcaagatcaagaaggaagcgtctgac
ctggacaagctgattgacaagaccgagaaagagtacaacgacttgagggacgacctgaga
gggaaggagactgaggtccgcaagctgctggagaagggcaagacggagcagcagactgcc
gatcagttgctggctcgtgtcgatgctgccaaggcgctggctgaggaggccgccaagaag
gggaggaccacctaccaggaggcccaagacattctgggaaatctgagagattttgacaag
cgggtgaatgacaacaagacggcagctgaggacgccatgaagagaatcccagagatcaac
gctaccatcatcgcggccaatgagaagaccaagcaggctgagggggcactaggcaacgca
gctgcagacgccaaggaggccaagagcaaggcagaggaggcagaaaagatagccagcgct
gtgcagaagggttctgctaagaccaaggcggatgcagagaaggcctttgaggacactatg
atgctggatggggaggtgaacggcatgatggaccagctgagtgcagccgaggcagagctg
gccaagaagaaagctgaggccgaccaggacatgatgatggctagcatggcatcagacaat
gcgaaggaagcagaggacaacgcccgcaaagccaagagtgctgtcaggaccgttctcaac
accatcaacgacctgctcaagtcactgggcaacattgacaaggtggacctgagcaagttg
ggcttgattgaagggtcactgaagcaggccaaggacaaaatggcgaacagcgacctggac
cgcaagctggcggagctgaatgatgtggccaagagccaagaggagatgatcaccgactac
gacaggcagatcagggagatccggtctgacatcgccaacctcaacgacatcaagaacact
ttacccgacggctgcttcaacaccccatccctagagcgaccttaa
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integrated database retrieval system