Salvelinus namaycush (lake trout): 120020398
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Entry
120020398 CDS
T07522
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
snh04517
IgSF CAM signaling
snh04520
Adherens junction
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120020398
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120020398
09144 Cellular community - eukaryotes
04520 Adherens junction
120020398
04530 Tight junction
120020398
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120020398
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120020398
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Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
120020398
NCBI-ProteinID:
XP_038819948
UniProt:
A0A8U0TLG0
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All DBs
Position
25:25515703..25742552
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AA seq
1417 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKIHILIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDVLCDVADDKDRLVAVYDEQEPHHGGDGTSASSTGTQSPDLFATELNTSSMSAFQPYQ
AASEIEVTPSALRTNMPLHVRRSSDPALATVNGPFSDPRVTLPPEEPSRKNPTRWSTTAG
FLKPQHSVGDTSTDANSLERKGKVVDTYRSLPRDSGTWANQREFQRETARSSLSANHPMV
DRWLERQEQEEGGHGEEENGRIEPVGRADSCMAHTTVRSLDDIVKLVEVSNDGGPLGIHV
VPFSAQDRRTLGLLVKRLERGGKAEQHSLFQENDCIVRINNGDLRNIRFEQAQNMFRQAM
RSPVIMFHVVPNLMKAQYEQLSHSERNLNVAYSSGSFSPDSLASERGSTTSGLDHTPQRM
SRGPHPHQHPEQGDAYTSLPHLHGLAHGGSMGKPPLGYAPPGRTPSPHRVLNSTPTAGFT
KKVGRRLNIQLKKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGHLKAGDRLLE
VNGVDLVGLTQEEVVCLLRATPMGGAVRLVVLRLEETFLPREVNAEPQMQSPRDLKVEED
DLVLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHSDLGIFVKSIINGGAACKDG
RLRVNDQLIAVNGESLLGKTNQEAMETLRKSMSVEGNKRGMIQLIVARRVTKRNELEASG
SPLGPEQTLNSTLLDDRERRISHSLYGGIEGLDDNLMPRQTLMGRMMGNYQLSPTVNMPQ
DDTVIIEDDRLPVLPTHLSDQSSSSSHDDVGFHVEVPPPWAKEIQIQNESPLSPDDTDPD
GAFQREGFGRQSMSEKRTKQFGDASQLEIIKTRKSKSMDLVADEINLTPRKENTPGSSTR
DVGPFLGLKKSSSLESLQTAVAEVTLNGDMPFHRPRPRIIRGRGCNESFRAAIDKSYDRP
AAKEDDDEDMETYSGNIKRSVTICPVEEDTEESSRSGRDSVSTVADLTPLHNTERPLVNG
NRTNEDEKDKGGTDKRKQKDKEKDSKNKAKKGMLKGLGDMFRFGKHRKDGEKIERKVSSK
WRPEELHASEEETLRMRLEQERIQLKTQELRERQARERDYAEILDINLSRDEEHPYAGIG
PLDTSLGSGHSRPQSPRDNDHHHQDSSLYTQVGKARNANGRPPSADSNRLAPSNHDRIQR
LRHEFQQARGDDDPDDRRRTYSFEQPWQNTTNTGPGPYQTDRQQTGRHSVSVEMQIQRQR
QEERDAFQQAQRQYSSLPRQPRKNPSCISQDSWVKVYPPGEGFQTTKENPRYSSYKGSRN
GYPGVSSVNARVLMEAQELLRQEQRRREQEAKGKQLLLAPPQEHHGNKTYNATPSYSAHK
DPVSPKGPYRQDVPPSPSQLARLNRLQGPEKGRPFYS
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgactgtgtgttttggaaggactagggtggtggtaccgtgcggagatggaaat
atcaaaatccatattctcatccagcaagccgtcatgagatacaaaaaagccattgcaaag
gatgccagctactggttacaggtgcaccggttggagcatggggacggaggtatcctggac
ctggatgacgtgctgtgtgatgtggctgatgacaaagaccggctggtggcggtgtatgat
gaacaggaacctcaccatggtggcgacggcaccagcgccagctcaacgggcacccagagt
cccgacctgtttgccaccgagctcaacacaagcagcatgtctgctttccagccctaccag
gccgccagcgagatagaagtcactccgtccgccctccgaactaatatgcccctccatgtg
cgtcgcagcagtgatccagcactggcgacggtcaacgggccattcagcgacccccgtgtg
accctgccgccagaggagccgtccaggaagaaccccacccgctggtccaccacagctggt
ttcctcaaaccacaacactctgttggagacaccagcactgacgccaacagcctggagaga
aagggtaaggttgtggacacgtaccgtagtctcccccgtgactcagggacctgggcaaac
cagagagagttccagagagagacggcccgctcctccctgagtgccaaccaccccatggta
gaccgctggctggagagacaggagcaggaggagggggggcatggggaggaggagaacggc
aggatcgagccggttggacgagctgactcctgtatggcccacaccactgtgaggtcactg
gatgacattgtaaagctggtagaagtgtccaatgacggcgggcccttggggatccatgta
gtgcctttcagtgcccaggaccgcaggactctcggcttgttggtcaagcgcctggagagg
ggaggcaaggcggagcaacatagtctgttccaggagaatgactgcatcgtacgcattaat
aatggagacctgcgaaacatccgcttcgaacaagcccagaacatgttccgccaggccatg
cgttcaccagtcatcatgttccatgtagttcccaacctgatgaaggcccagtacgagcag
ctgtcacacagcgagaggaacctcaacgtggcctactcatctggaagcttcagccctgac
tccctagccagcgagagaggcagcacaacttcaggcctggaccacaccccacagaggatg
tcccgtggtccccaccctcaccagcaccccgagcagggtgacgcctacacctctctacct
cacctccatgggcttgcccatgggggctccatgggcaagcccccattaggctatgcccct
ccaggccgcaccccctcccctcatagggtgctaaactccacccccacggcgggcttcacc
aaaaaggtcggcaggagactgaacatccagctgaaaaaaggtccggagggtctgggtttc
agcatcacatcgcgtgacgtccccatcggcggctcggcgcccatctacgtgaagaacatc
ctgccccgaggagctgccatccaggacggacaccttaaggctggagacaggctgctggag
gtgaacggagtggacctggttgggttgacccaggaggaggtggtctgtctgctgagggcc
acgcccatgggaggggctgtgaggcttgtggtgttacgactggaggagaccttcctgccc
agagaagtgaatgcagaaccccagatgcaaagccccagagatttgaaggttgaggaggat
gacctggtgttgaccccggatggtaccagggagttcctgacctttgagatccctctgagt
gactccgggtcggcggggttaggggtcagcgtcaagggcaaccgctccaaggagaaccac
tctgacctgggcatctttgtcaagtccatcatcaacgggggagctgcctgcaaggatgga
aggctgcgggtcaacgaccagctgatagcggtgaacggggagtcgttgctaggcaagacc
aaccaggaagccatggagacgctaaggaagtccatgtcggtagaaggcaacaagcggggg
atgattcagctgattgtggccaggagggtcactaaacgcaacgagctggaggcctctggg
agccccctgggaccggagcagaccctcaactccaccctgctggacgaccgggagcgtcgt
atctcccactccctgtacggaggcatagagggcctggacgacaacctgatgccacggcag
accctaatgggccgaatgatgggtaactaccagctctcccctacagtcaacatgccccag
gacgacacagtcatcatcgaagacgataggctgcctgtacttcctacccacctctctgac
caatcgtcttccagctcccatgacgacgtggggttccatgtggaggtccctcccccctgg
gccaaagagattcaaattcagaatgagagccctctgagccctgatgacaccgacccagac
ggagcctttcagagggagggcttcggcagacagagcatgtccgagaaacggacaaagcag
tttggagatgccagtcagctggagatcatcaagacacgcaagtccaagagcatggatcta
gtagccgacgagattaacctcacccctcgcaaagagaacacgccagggtcttccaccagg
gacgtgggtcctttcttaggcctcaagaagtccagctctctagagagtttacagacagcc
gttgccgaggtaacgctgaatggtgacatgcccttccacaggccacgcccacgcatcatc
agggggcggggctgcaatgagagcttccgggctgccatcgacaagtcatacgacaggcca
gccgctaaagaggatgacgatgaggacatggagacatattccggcaatataaaacgttct
gttactatctgtccagtggaggaggacaccgaggagagctctcggtccgggcgcgactct
gtgtccaccgtggcagatctgacgccactgcataacaccgagagaccgctggtcaacggc
aaccgcaccaatgaagacgagaaggacaagggagggactgacaaaaggaaacagaaggac
aaagagaaggacagcaagaacaaggctaaaaaaggcatgctgaaaggcctgggagacatg
ttcaggtttggtaaacatcgcaaggacggagagaaaattgagcgtaaagtgtcaagcaag
tggaggccggaagagctgcacgcctcagaggaagaaacactgaggatgagactggagcag
gagaggatccagcttaagacccaggagctacgggagcggcaggcacgggagagggactac
gctgagatcctggacatcaacctaagccgagacgaggagcacccctatgccggcatcggg
cccctggacacgtccctgggcagcgggcacagccgtccccaaagcccccgagacaacgac
caccaccaccaagactcgtccctctacacacaagtcggcaaggcccgcaacgcaaacgga
cgccctccctccgccgacagcaacagactagcgcctagcaaccacgaccggatacagcgg
ctgaggcatgagttccagcaggccaggggggatgatgacccagacgaccggagacgcacc
tatagcttcgagcagccctggcagaacaccaccaacacaggtccaggcccgtaccagaca
gacagacaacagacaggccgacactctgtgtctgtagagatgcagatacagagacagagg
caggaggagagagacgccttccaacaggcgcagagacagtacagctccctgccacgacaa
cccaggaagaaccctagctgcatctctcaggactcctgggtcaaggtctacccgccgggc
gagggcttccagacgaccaaggagaaccctcgctactccagctacaagggctccaggaac
ggctacccaggggtgagcagtgtgaatgcccgcgtcttgatggaggcccaggagctgctg
aggcaggagcagagacgcagggagcaggaggccaaagggaagcagctactactagcaccc
ccgcaggagcaccacgggaacaaaacctacaacgccactccttcatactcggctcacaag
gaccctgtgtcgcctaagggcccctatagacaggacgtacccccctcgccctcccagctg
gccaggctcaacaggctgcaggggcctgagaaggggaggcccttctactcctga
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integrated database retrieval system
