Salvelinus namaycush (lake trout): 120020407
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Entry
120020407 CDS
T07522
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00310
Lysine degradation
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120020407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120020407
03036 Chromosome and associated proteins [BR:
snh03036
]
120020407
Enzymes [BR:
snh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
120020407
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120020407
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120020407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_3rep
zf-C2H2_11
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
120020407
NCBI-ProteinID:
XP_038819978
UniProt:
A0A8U0TLH0
LinkDB
All DBs
Position
Sna2:complement(12270471..12282535)
Genome browser
AA seq
1756 aa
AA seq
DB search
MAVPGGTKEMLADIPCHVWKGLPDSMRLSCSAVDQSRIGVWASRLIPKGKRFGPFVGEKK
KRSQVSSNVYMWEVYFPARGWMCVDATDPMKGNWLRYVNWAHSTQEQNLFPMEINRAIYY
KVLRPIGPGEELLVWYNGEDNPEITAALEEERASNLNKKNSPRAKRARKLLERARQACLG
GFRGPKQTGGTKPIVTEMWDTEEGPNEEDERPSPGPSQGTRESSTMGSNSLSQAQFISAA
MREKDEEEGDEEDRRDLQQGPSLITQSARSAESEDRSEQPDLPLSHSSPGEVGPGSLQTA
SSLPRPEPEADPYLDPDLEGDPHGEESHPCQHCERHFSTKQGLERHTHIHATANQQTHTF
KCRYCGKSFGSQVGRRRHERRHENGPKNKGQRPGSLAGTATLLSPLGQADCSSPDCATVS
GHYVVMGSPVPGGLMQSPQVVRKDPAAESDQPFIVDENGETKELHPCKYCNKAFGTHTNM
RRHQRRIHERHLLPKGVRRKGMLLQESPQQQLQRLPEQSPSASPPPVYVPSADTEDEGDR
EEYMVDISDNISENLSLYIDGKILSTSSVSGCEVIEVDSSSAALFGLDAVVISPNQISQA
FKVDTRTCAVKQVSNLGQPTTKRRTSTPPLMPSLKMESENGSSSASSSSSTSSSSALLVE
SLFPQSSDSLAFQKEKTIYLSPKLKQLLQTQTDGQKPTIALIADSHRLAPPLSVASLPAA
SGRFKRRTASPPSSPQLSPALKADGCKSEAGVSSYTLKVPKLESLGMSSAWSLSSKEERD
TMSPSGKDGCSWSASRSGGNSCNQQPLDLSSGISKWSDGFNKTPREEVLDLSMSRKSTAE
PESKGSPAPTQPHTKKKKPNTSMLEKVLMNEYAGLNPAGEEGSCALGSPDSQYTASSGTG
TASHSPSSNMPFESADPSPPSLTPVTMNPSSPCVSSLTSPTPPPPVLPSMPSPDCPTSSS
LPLLSPKMSPRSIDHCEDEPVCVSNSTTAETILAAVSNSYGDEKHVTKPVDPTHNTDPII
GKALSNPSTESSSVSDVVPVSLSSAQSKPAKSGNHSFLDIQINPDLEPIITAGQGKSQCS
ELPVLSPVKESPLTASSTSPVGISDVPAPSVVSPASLSSTVIKEEVQHMDQLADLGLPPG
ATVSSPPSAAAAEKPSEEVVQEEGLEPDPFSKSFVCNVCEDPFRSIKELSRHIVEHAAEW
PYRCEFCVQLFGNAPALLEHRTALHGVGRIFVCSFCSKEFAFLCNLQQHHKDLHPSQPCT
HAAVESSKLRPQNYTDPARAKEESNPSSTTGPESSAEAASSQGGEVKEEEQPDTNGKHEE
AGPEDPTEELYTTIKIMASEGGKPKGPDVRLGINQHYPSFKPPPFPYHNRTAADSVASAT
NFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPIPLRQIVK
PQNGALSPASAANAGHTAFRRMGQPKRLNFNQEPPGKTKMSSLSKKKNQLVQKAITQRNK
TAATAKAPSQVKEEEPQEVHVCPHCSREFTYPASLSKHIAVSCPMKPVSKKAKKGAAAEE
ATPAVDKNMSLRRRTTDSEIQQPETAEPVPKTLGKTRARTSGPGSAEAETPPPPGKGKTA
VTQVRTKRPASFPAATVSLNMKSKKGKVQSLPPTPLPSETPSDSAPLPATQTKQRMGKEM
PPKKVAEMKLPLQKPSQVPPKKEGERFSLRARERAGGPVTRSLQMANNVAPVEVKTEDLS
SQGPKETQESLLKLAR
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcctggagggacaaaggaaatgctcgctgacattccgtgccatgtgtggaag
ggcttgcccgatagcatgagactaagctgctctgctgttgatcaaagtcgcattggtgtc
tgggcctcgaggctgatccctaaaggcaagaggttcggcccgtttgtaggagagaagaaa
aagaggtcccaggtgtccagcaatgtttacatgtgggaggtgtattttccagccaggggc
tggatgtgtgtggatgctacagaccccatgaaggggaactggctacggtatgtaaactgg
gcacactccactcaagaacagaaccttttccccatggagatcaaccgagccatttactac
aaagtgttacggccaatcggacccggggaagagttgctggtgtggtacaatggggaagac
aaccctgagataacagctgcattagaggaagaaagagccagcaatctgaacaagaaaaat
tcacccagggcaaagcgagccagaaaactgttggagagagccagacaggcttgtttgggt
ggattccgtgggcccaaacaaacaggcggaaccaaacctattgtcacagagatgtgggat
acagaggaaggtccaaatgaggaggacgagagaccatctccagggccttcacaggggact
cgggagagctccaccatggggagtaacagcctctctcaagcccagttcatctcagcagca
atgagagagaaagatgaggaggagggtgatgaggaagaccgaagggatctgcagcagggg
ccgtcgctgataacgcagagtgctcggtctgctgagtcggaggataggagtgagcagcct
gatctgccactaagccatagcagcccaggtgaggtggggcctgggagccttcagactgcc
tcatccctaccaaggcctgaaccagaggctgacccatacctcgaccctgaccttgaaggt
gacccccacggagaggagtcccatccctgccagcactgcgagcgccatttctccaccaaa
cagggcttggagcgccacacacacatccatgccactgcaaaccagcagacgcacacgttc
aaatgccgttactgtggcaagtcctttggctcgcaggtgggacgtcggcggcacgagcgg
aggcatgagaacgggccaaagaacaagggccaaaggcctggctcactggctgggactgct
actttactcagtcctctggggcaggctgactgttccagcccagactgtgccactgtctct
ggccactacgttgtcatggggtccccggtccctggaggacttatgcagagccctcaggtt
gtgaggaaggaccctgcggctgagagtgaccagccctttatcgtggatgagaatggagag
acaaaggagcttcatccttgcaagtactgtaataaggctttcggcactcacaccaacatg
cgcagacaccagcgcagaatccacgagcgccacttactgcccaagggtgtgcgcaggaaa
ggcatgctgctgcaggagagcccgcaacagcagctgcagcgtctgcctgagcagtccccc
agtgccagcccaccccctgtctatgtgcctagtgcagacactgaggatgagggggaccga
gaggagtacatggtcgacatatccgataacatctcggagaatctcagcctgtacatcgac
ggcaagatcctgtccactagttcagtcagcggctgtgaagtgatcgaagtggactccagt
tctgcagcactgtttggtctcgatgcagtggtcatcagccccaatcagatcagtcaggct
ttcaaagtggacaccaggacctgtgctgtgaagcaggtctccaacctcggccagcccacg
acgaaaaggagaacgtcgacacccccgctcatgcccagtcttaaaatggagtctgaaaat
gggtcctcctctgcctcctcttcctcctccacgtcttcctcatctgccttgttggtggaa
agtctcttccctcagtcctcagactcattagcatttcaaaaggagaaaactatctatctg
tctcctaagctcaaacagctcctccagactcagacagacggtcagaaacccaccatcgcc
ctgatagcagacagccacagattagctccccctctctccgttgcgtccctgcctgcagcc
tcaggcaggtttaagagaagaacggcttcccctccctcatctccacagctcagccctgcg
ctgaaagcagatggctgtaagagcgaggcaggggtctcgtcgtacaccctcaaggtgcca
aagctggagagcctgggcatgtcctctgcctggagtctgtccagcaaggaggagagggac
accatgagtcccagcgggaaggacgggtgcagctggtctgcctctcggagcggagggaac
tcatgtaatcagcagcccttggacctttccagcggcatcagtaaatggagtgacggcttc
aacaagacgcccagggaggaagtgctggatttaagcatgagtcggaagagtacagcggag
ccagagtccaagggaagtccagctccgacacagccacacaccaagaagaagaagcccaat
accagtatgctagagaaggtgttgatgaatgagtacgctggcttaaacccagcaggagag
gagggctcttgtgccctgggaagcccagattctcagtatactgcaagcagtggtacaggc
acagcttctcacagtccctcttccaatatgccctttgaatcagccgatccctccccgccc
tctctaacccctgtcactatgaatccctcctccccctgcgtctccagcctgacctctcca
actccacctccccctgtcctaccctctatgccctcaccagactgccccacttccagctct
ctccctctcctctcccctaaaatgtcccccagatccattgaccattgtgaggacgagcca
gtttgtgtatctaactctactacagcagagacaatattagctgcggtaagtaacagttat
ggagatgagaaacatgtcactaagccagtagaccccacccacaatacagatcccattatc
gggaaagctttatcaaacccctctacagagtcctcctcagtatctgatgttgtccctgtg
agtctatcctcagcacaatctaaacctgctaagagtgggaaccacagtttcttagatatc
caaattaacccagacctggaaccgattattactgcgggacaggggaaatcccaatgttct
gaactccctgttttatcacccgtaaaagaatcccccctcactgcctcatcgacctctcct
gttggaatatcagatgtcccagctccgtcagtggtctccccagcatcactctctagcact
gtgattaaagaggaggtccagcacatggatcagctggctgatttaggccttcctcctggt
gccacagtgtcttcacctccatctgctgctgctgctgaaaagccctctgaggaggtggtg
caggaggagggattggagccagaccccttcagtaagagctttgtgtgtaacgtgtgtgag
gatcccttccgctccatcaaagagctcagtcggcacatcgtggagcacgccgctgagtgg
ccctacaggtgtgagttctgtgtgcagctgttcgggaacgccccggccctgctggagcac
cgcacagccctccatggtgtgggacgcatctttgtctgctccttctgctccaaggagttc
gccttcctctgcaacctccagcagcaccacaaagacctgcatcccagccagccgtgcaca
cacgcagcggtggagagcagcaagctgaggccacagaactacacagacccagccagggcc
aaagaggagagtaacccctcctcaaccacagggcctgagtcctctgctgaagctgcctcc
tcccagggaggggaggtgaaggaggaggagcagcctgatactaacgggaagcatgaagag
gctggaccggaggacccaactgaagagctctacactacaataaagatcatggcttctgag
ggaggcaagcctaaaggcccagacgtacgcctgggcattaatcaacactaccccagtttc
aagccaccccccttcccctaccacaaccgcacggctgcagactcagtggcctcggccacc
aacttcactacccacaacatcccccagacattcagcactgccatccgatgcaccaagtgc
ggcaagagctttgataacatgcccgagctgcacaagcacatactagcctgtgccaacgcc
agtgataagaggcggtacactcccaagaagaaccccatccctctcagacagatagtgaag
ccccagaacggagctctgtcgcctgcctctgctgccaacgcagggcacaccgccttccgc
agaatgggccaacccaagaggctgaacttcaaccaagaaccgcctggcaaaaccaagatg
agttccctcagtaagaagaagaaccagctggttcagaaggccatcactcagaggaataag
actgctgctactgctaaggcccctagccaggttaaagaggaggagccgcaggaggtccat
gtgtgccctcactgcagtcgggagttcacttaccctgccagcctcagtaaacatatagca
gtcagctgtcccatgaagcctgtctctaaaaaggccaaaaagggagcagcagcagaagag
gcaacaccagctgtagataaaaacatgagccttcgaaggagaaccacagactctgagatc
cagcagccagagactgctgaaccggtgcccaaaaccctgggcaaaacacgcgctcgcact
tctggacccggctctgcagaggctgagaccccaccgccgccaggtaaaggaaagacggct
gtcacgcaggtgcgtaccaagaggccagcctctttccctgctgccacagtttctctcaac
atgaaaagtaaaaaaggtaaagttcaatcgttaccccccaccccgttgccctctgagact
cccagtgactctgcaccactgccagcaacccagacaaagcaacgcatgggcaaggaaatg
ccgcccaagaaggtagcagagatgaaattgcccctacagaagccgtctcaggtcccgcct
aagaaagaaggggaacggttctctctgagagcgagggagcgagctggtgggccggtgaca
cggagcctacagatggccaacaatgtagctcctgtggaggtgaaaacagaggacctctcc
agccagggacctaaagagacccaggagtccttgctgaaattagcgaggtag
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integrated database retrieval system
