Salvelinus namaycush (lake trout): 120020441
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Entry
120020441 CDS
T07522
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120020441
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120020441
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_Nup35
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
120020441
NCBI-ProteinID:
XP_038820033
UniProt:
A0A8U0P7G4
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Position
Sna25:29069530..29078738
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AA seq
542 aa
AA seq
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MESIVSDVAVGMKRGSDDLNLYSTSPNSVTDNGNDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVMPQVRNVPVF
IQFSNHKELKTDSTLNQRAQAVLQAVSAVQDGGSPNSDNSTLDSVLAHAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPTVDPAMAAAYNKDSSLLGTPSGM
GAPYSNGGGFQSSLSLSQGGGAINPMSAAAAAAAAAGRMVLSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTL
SKHQAVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVPEDVTEE
DLRLLFSNAGGIVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKVSFSKS
TI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcattgtcagtgatgttgcagttggcatgaagagaggctcagatgatttgaat
ctctacagcaccagccctaactctgtgactgataacggcaatgacagcagtaagaaactg
agagtggaggacaggatggagagtcccccttcccgcgtgctccacatcaggaagttgccc
agcgaggtgtcagagacagaggtcatcgccctgggcctaccattcggcaaggtcaccaac
atcctcatgctgaaaggaaaaaatcaggcgttcctggagttgggtacggaggaggcggct
gttaccatggtgaactactacacggcggtgatgcctcaggtccgcaacgtccccgtgttc
atccagttctctaaccacaaggagctgaagacagacagcactctcaaccagcgcgcacag
gctgtcctccaggccgtgtcggcagtgcaggatggtggctctcccaactctgacaacagt
acgctggacagtgttctagcccatgcccccagccctgtactcaggataatcatcgacaac
atgttctaccccgtcactctggacgtcctccagcagatcttctccaagtttggaacagtc
atgaagatcatcacgttcaccaagaacaaccagttccaggccctgctccagttcagcgaa
ccagtcaacgcccagcaagccagactgtccctggacggccagaacatctacaattcctgc
tgcacgctgcggatcgacttctccaagctggtcaacctgaacgtcaagtacaacaatgac
aagagccgggactacacccggcccgagctccctgccggcgacggccagcccacagtagac
cctgccatggccgccgcctataacaaggactcctccctgctcggtaccccctctggaatg
ggagcgccctactctaatggtggagggtttcagtcttctctctccctctcgcagggcgga
ggagccatcaatccaatgagtgctgcggctgcagcggcggcggctgcagggaggatggtg
ctctccggacactccggctgcagcggcgtgctcctggtcagcaacctgaacgaagagatg
gttacgccccaaagtctgtttaccctcttcggggtgtacggtgatgctcagcgcgtgaag
atcctctacaataagaaggacagtgctcttatccagatgtcggacgggaaccaggcccag
ctcgcgatgagccacctgaatggccagaagatgtacgggaagatcatccgtgtgacgctt
tccaagcaccaggcagtgcagctgcccagggaagggctggatgaccagggcctaaccaag
gacttcaccaattccccactgcaccggttcaagaagcccggctccaagaactttcagaac
atcttccctccttccgccacgctccacctctccaacgtcccggaggatgtgacggaggag
gatctgcgactgctgttctctaatgctggtggcattgtgaaggccttcaagtttttccaa
ggccacaaaatggcgctactccagatgtccacggtggaggaggccatccaggccttaatg
gacctccacaactacgacatgggcagcaaccaccacctgaaggtctccttctccaagtcc
accatctag
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