Salvelinus namaycush (lake trout): 120020448 Help Entry 120020448         CDS       T07522                                  Symbol tpra Name (RefSeq) nucleoprotein TPR isoform X1   KO K09291   nucleoprotein TPR Organism snh  Salvelinus namaycush (lake trout) Pathway snh03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:snh00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     120020448 (tpra)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:snh03019]     120020448 (tpra) Messenger RNA biogenesis [BR:snh03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      120020448 (tpra) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_MLP1_2 Fez1 GAS ERM_helical Motif Other DBs NCBI-GeneID:  120020448 NCBI-ProteinID:  XP_038820046 UniProt:  A0A8U0P6I8 LinkDB All DBs Position Sna25:complement(29821634..29847326) Genome browser AA seq 2213 aa AA seqDB search MAAVLLQVLERTELNKLPKAAQNKLEKFLTDQKNEIESLKTQHERFKADCEQQYFDVEKR LAESQEQIVSHTRNYQTLKEENTKLIEELNNLKGVDVESSEEKESQQPSKAKYEIEAERR ELARLLEKRTQEVENLTEDVKRLNDKLVETNTAKIDLQLKLDDIQSSEVSIQHREKRMEQ EKELLQNQNTWLNSELKTKTEELLSVSRDKGKEILELKCSFECKKDEVTRLQTQVTNLKK SSENLQKRVEDLMTKLKEAKDHHSTMEEKYRNEQNAHIKLSNLYKGSASDAESKNEELNR AVEELHKLVKEAGDARQNMEKKLADMEGSKSKQEAEMKEKFKKMELENANLRASDKKRSM PVLTEEELDSMCPTAAAVAKIVKPGMKFMELYNAFVDVQDQLLVEKQENRRVTRVLDEIV QEVEEKAPILKRQREEYESMQRSMNSLCAKLEQARTEIHSLQKETDEAKKHCSNLEKDNQ HSERELEDMSQQVRVLLVELEEARGNPVVREETMNLSSSSEIINPRQVSFRSVEELQRQN QSMLARLRELGEKMEREQTEAKSARVTQLEQQLEKVQKELEIIKEQRNQQKQLADSNGRQ RDMYRILLSQSTGFNLPPQGPTQEAAPQTYTPSRPSFPPPTRSTPMRASAAESSQTIQAK AALKQLNDSFTTYKNEKAVNDRMLNEQNEKLQEQLSAVRSQKAKLSTQLEFASKRYEMLQ ENVNGYRREIAALHDKSQKMAATAQKHEQIIHTMTQDLRAANEKLAMAEVRGENLKKERD MLKSAESRLNQEKEAMMAEQRNQNLLLTNLKSIQLTMERTETETGQRLNSQIERLERELT QFKKKLAEEVEQRHTLGRNQDAQLLEAKKQLEAQCALHQKTKELLKNAEQQANLLKQQLS HAESQNQGSGLGQGQSLGQTNSRAPIRAPLRAPSQTLAQAQSQATQEAQAKLQAELEEVR GRLQQAEKQISDLQERLQNASTNVEQYRIVVLSLEESLSKEKQARSPVETRLKEAQEFQR GLEKKLVEAEKEKQELREEKRKAVDIVEKQVNELKRTMKNLQSELQEAEERKAAAVTQEQ KAMQDSLQQGKLAAEAQNKYERELMLHAADVEALQAVKKQGLQGNQSRKQLEDKAKQITT QLQEARTNWNQLEKKLKEDLSKQQKRADELQKQNGLLHQQMESLGAKMAATVQQQQQASR ESSLNLSFSEEGKSQEQILEILRFVRREKEIAETQFEVAEVETQRYKQQVEHQDRELKEL QESLNAEREKLQLTAKTMAQHDEKMKRMENLNVLVETNKMLKEERERLEQELHQTQAKVR KLEADITPLQDSNSELSEKNGMLQAEKKLLEEDCKRWKARTQQLVSQQKDTDQEENKKLH SEREAHLKRIQQLSEETGRLKAEVARTHASVTTAQSQAQNLKEILGKVTTERDAKTLDIQ EKCKTITQVKKIGRRYKTQYEELKVQHDKLVAEAAAKPAQEEVLQAVQQAQLQAQHAQQA SAQEIQSLKDSLSQAETKVKDLEGQLKNVQETVNERNTEMGRLRQELTRLQEQSAQGTQS EVTRLKQELTRLQEQFTQAQGTQGEVTRLKQELTRLQEQSTQAQGTQGEVTRLKQELTRL QEQSTQAQGTQGEVTRLKQELTRLQEQSTQAQGTQGEVTRLKQELTRLQEQSTQAQGTQG EVTRLKQELQEKTAQEESLRQQMADKEEKTKKVFMGAKQKINQLNIAKEHLTKEVEELKQ QREEQEVRLSALKSQYEGRLHRQDREIRELRDHRDEQPHRDESQDQGKNKTQEQQQRAPE QRQINQRTSQAADRGSGSSSSSEQPPTANIKPTTVSGGAPSKPSPIPGNKSTPRASIRPM VPITMPTPTATVMPHTQSESQEVLQSSEGGTPVEHVSVFGSTSGSVRSTSPSVQNITHSQ FQPISSQATAFVQPTQQQQAPPTAEPASQETEAGPSGQVERPSTSTAVFGSAIATGGSAG PKCAREVELEARAESPDTALENPDEPPIPKKLRIIQRVGLEEENEEGTDGEAEGSGENQE TPDGSQELPDVSFPVLGEVEEEDDGVSQSVPSDHQVTHQPSDTQDSSEERQPDVIIIDTD SSSREEEEEEEEAEQYEEEVEEEKDDDDDDEDQGMGREESNEGSGDANEPFEGDETGPET SEPASENEESMGAIDSTSQKQADSQSGEGSSSTTESFPMAMSDPPQRTTTAYR NT seq 6642 nt NT seq  +upstreamnt  +downstreamnt atggcggcagttctgctccaagttttggagcgtacagagcttaataaacttcctaaagct gctcaaaacaaattagaaaagttccttactgaccaaaagaatgaaatcgaatccctcaaa acgcagcacgagcggttcaaagcggactgtgagcagcaatactttgacgttgagaagaga ttggcagagagtcaggagcagattgtgtctcacacccggaattaccagactctcaaagag gagaataccaaactcatcgaagagctgaacaatctgaaaggtgtggatgtggaatcgtca gaggagaaggaatcacagcagccgagcaaagccaaatatgagattgaggccgaaaggcgg gaactggctcgtctgcttgaaaagagaactcaagaagtggaaaatctcaccgaggatgtc aagcggctcaatgacaagctggtggagaccaacacagccaaaatagatctacagctcaaa ctggatgacatccaatcttctgaggtctccattcagcaccgtgagaaacgtatggagcag gagaaggagctgctgcagaatcagaacacgtggctgaactctgaactgaagaccaagaca gaggagctgctatcagtctccagggacaagggcaaggagatcctggagctcaagtgcagc tttgagtgcaagaaggacgaggtcacaagacttcaaacccaagtcaccaatctgaagaag agcagtgagaacctgcagaagcgagtggaggacctgatgacaaaactgaaagaggctaaa gaccatcatagcaccatggaggagaagtaccgcaatgaacagaatgcccacatcaagctc tccaacttgtacaaggggtcagcgtcagatgcagagtccaagaacgaggagttgaacagg gccgtggaggagctgcacaagctggtgaaggaagctggtgatgcgagacagaacatggag aagaagctggcagacatggaggggtcaaagagcaaacaggaggctgagatgaaggagaag tttaagaagatggagctggagaacgccaacctgcgtgcctcagataagaaaagaagcatg ccagtgctcacagaggaagagttggactccatgtgtccgaccgcagctgctgtggccaag attgtcaagcctggaatgaagttcatggagctgtacaacgcattcgtggacgtccaggac cagttgctcgtggagaagcaggagaaccggcgtgtgacgcgcgtgctggacgagatcgtg caggaggtggaggagaaggcgcccatcctaaagcgccagcgggaggagtatgagagcatg cagaggtccatgaacagcctctgtgccaaactggaacaggccaggacggagatccacagc ctgcagaaagagacagatgaggccaaaaagcactgctccaacctggagaaggacaaccag cactctgagagagagctggaggacatgtcccagcaggtgcgcgtcctgctagtggagctg gaggaggcgcgtggcaacccggtggtccgcgaggagacgatgaacctgagcagcagctct gagatcatcaacccgcggcaggtttccttccgcagtgtggaggagttgcagcggcagaac cagagcatgctggcacgtctccgggagctgggggagaagatggagagagagcagaccgag gccaagtccgcacgtgtgacccagctggaacagcagctagagaaggtccagaaggagctg gagattataaaggagcagagaaaccagcaaaagcagttggctgactccaacggccgccag agagacatgtaccgcatcctgctgtcccagagcaccggcttcaacctcccaccacaaggt cctacacaggaggcagccccccagacgtacacccccagccggccctccttcccccctccc accaggtccacccccatgagggcttcagccgctgagtcttcccagaccatccaggccaag gctgctctcaaacagttgaacgactccttcaccacatacaagaatgagaaggcggtgaac gacaggatgctgaatgagcagaacgagaagctacaggagcagctgtctgcggtccgctcc cagaaggccaagctctccacacagctggagttcgcctccaagaggtacgagatgctgcag gagaatgtaaacggctacaggcgggagatcgctgctctgcacgataagagccagaagatg gccgccacggctcagaaacatgagcagatcatccacaccatgacccaggatctccgggca gccaatgagaagctggccatggcagaggtgcgtggtgagaacctgaagaaagagagagac atgctgaagtcagcagagtccagactgaaccaggagaaggaagccatgatggctgagcag cgcaaccagaacctcctgctcaccaacctcaagtccatccagctgacgatggagcgtact gagaccgagaccgggcagcgtctgaacagccagatagagagactggagagagagctcacc cagtttaagaagaaactggctgaggaggtggagcagaggcacacgctgggccgtaaccaa gatgctcaactgctggaggccaagaagcagctagaggcccagtgtgccctgcaccagaag accaaggagcttttgaagaatgctgagcagcaggctaaccttctgaaacaacagctcagc catgctgagagccagaaccagggttcaggtctgggccagggtcagagcctgggccagacc aactcccgggcacccatcagagcaccgttaagagctccatctcagaccctagctcaggcc cagtcccaggctacccaggaagcccaggccaagctccaggcagaactagaggaggtgcgc gggcgtctgcagcaggccgagaagcagatcagcgatctgcaggagcgcctgcagaacgcg agcactaacgtggagcagtaccgcatcgtggtgctcagcctggaggagtccctcagcaaa gagaaacaggctcgttctcctgtggagactcgtctaaaggaggcccaggagttccagcgt gggctggaaaagaagctggtggaggctgagaaggagaaacaggagctccgtgaggagaag aggaaggccgtggacattgtggagaaacaggtgaatgagctgaagaggactatgaaaaac ttgcagtcagagctgcaggaggctgaggagaggaaggctgcagccgtcacccaggaacag aaggccatgcaggacagcctgcagcagggcaagctggcagcggaggcccagaacaagtat gagcgggagctgatgctgcatgcggctgatgtggaggcgctacaggcggtcaagaaacaa ggcctgcaggggaaccagagcaggaagcagctggaggacaaggccaaacagatcaccacc cagctacaggaggctcgcaccaactggaaccagctggagaagaaactcaaggaggacctg tccaagcagcagaagcgggcagatgagctgcagaagcagaatggcctgctgcaccagcag atggagagcctgggagccaaaatggccgccacagtacagcagcagcaacaggctagtagg gagagcagcctcaacctgtccttcagcgaagagggcaagtcccaggaacagatcctggag atcctcaggtttgtgcgtcgtgagaaggagatcgcagagacacagtttgaggtggcagag gttgagacacagcgctacaaacaacaggttgaacaccaggaccgcgagctgaaggaacta caagagagcctcaacgctgagagagagaaactacagctgacagcgaagaccatggcccag cacgatgagaaaatgaagaggatggagaacttaaacgtgctggtggagaccaacaagatg ctgaaggaggagagggagaggctggaacaggagctgcaccagacccaggctaaagtgcgt aagctggaggcggacatcactcccctgcaggactccaactctgagctgagtgagaagaat ggcatgctgcaggctgagaagaaactgttggaagaggactgcaaacgctggaaggcccgc acacagcaactggtgagccagcagaaggacacagaccaggaggagaacaagaagctgcac tctgagcgagaggcccacctcaaacgcatccagcagctctctgaggagactgggagactg aaggctgaggtggccaggacccatgcgtcggtgaccacagcccagagccaggcgcagaac ctgaaggagattctgggcaaggtgaccaccgagagggatgcgaagaccctggacatccag gagaagtgcaagaccatcacgcaggtcaagaaaatcggacgacgttacaagacgcagtat gaggagctcaaagtgcagcacgacaagctggtggcggaggcagcagccaagccagcccag gaggaggtgctgcaggccgtgcagcaggcccagctgcaggctcaacatgcccagcaggcc tctgcccaagagatccagagcctgaaggactccctcagccaggctgagaccaaggtcaaa gacctggagggacaactgaaaaacgtacaggagacagtgaatgagcgcaacacagagatg gggcgtctgagacaggagctgacccggctccaggaacagtctgcacaggggacacagagt gaagtgacccggctgaaacaggagctgacccggctccaggaacagtttacccaggcccag gggacccagggtgaagtgacccgtctgaaacaggagctgacccggctccaggaacagtct acccaggcccaggggacccagggtgaagtgacccggctgaaacaggagctgacccggctc caggaacagtctacccaggcccaagggacccagggtgaagtgacccggctgaaacaggag ctgacccggctccaggaacagtctacccaggcccaggggacccagggtgaagtgacccgg ctgaaacaggagctgacccggctccaggaacagtctacccaggcccaggggacccagggt gaagtgactcggctgaaacaggagctgcaggagaagactgctcaggaggagtcgctacgg caacagatggccgacaaggaggagaagaccaagaaggtcttcatgggagccaagcagaag atcaaccaactcaacattgcgaaggagcatctgaccaaggaggtggaggagctgaagcag cagcgggaggagcaggaggtgcgtctgagtgctctcaagtcccagtatgagggccgtctg caccgacaggaccgagagatcagggagctccgagaccaccgtgacgaacaacctcataga gacgagtcccaggaccaggggaaaaataagacccaggagcagcagcagagagctccagaa cagaggcagatcaaccagaggacttcccaagctgcagacaggggaagtggttcttccagc tcttcagagcagccccccactgccaacatcaaacccaccacagtgtcgggcggtgccccc agtaaaccttcccccatccccgggaacaagtccacccccagggccagcatccgacccatg gtgcccataaccatgcccacacccacggccactgtcatgccccatacacagtctgaaagc caggaagtgctgcagtcctctgagggtggaacccctgtggaacacgtgtctgtgttcggc agcaccagcggctctgtccgctccaccagccctagcgtccagaacatcacgcactctcag tttcagccaatcagcagccaggccaccgccttcgtccagccaacccagcaacagcaggcc ccgcccaccgctgagccggccagtcaggagaccgaggcgggccctagtggtcaagtggag aggccctccacgtctacggctgtatttggctccgctattgctacagggggctctgctggg ccaaagtgtgcccgcgaggtggagctggaggctcgggcagagagccctgacacggccctg gagaacccagacgaaccacccatccccaagaagctccgtatcatccagagagtgggcctg gaggaggagaatgaagagggcactgatggagaggctgaggggtcaggggagaaccaggag actccagacggcagccaggagctaccagacgtgtcctttcctgtactgggagaggtggag gaagaggatgacggggtgtcccagtctgtcccctcagaccaccaggtgacccaccaaccc tctgacacccaggactccagcgaagagcgccagcctgacgtcatcatcatcgacacagac agctccagtcgagaagaagaagaggaagaggaggaggcagagcagtatgaggaagaggtg gaggaagagaaggatgatgatgatgatgacgaggaccaggggatgggaagagaggagagc aacgaggggagcggagacgccaacgagccgtttgaaggagacgagacgggccctgagacc tcggagcctgcctcggagaacgaggagagcatgggagctatagactccacctcccagaaa caggctgactcgcaaagcggtgaggggagcagcagtaccaccgaatccttccccatggcc atgtccgaccccccccaaagaactactacagcctaccgctag

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