Salvelinus namaycush (lake trout): 120020506
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Entry
120020506 CDS
T07522
Name
(RefSeq) cell adhesion molecule 3-like
KO
K06780
cell adhesion molecule 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecule (CAM) interaction
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120020506
04517 IgSF CAM signaling
120020506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120020506
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120020506
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Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C1-set
VEGFR1-3_N_Ig-like
C2-set_3
SMAGP
Syndecan
He_PIG
SIGLECL1_C
Motif
Other DBs
NCBI-GeneID:
120020506
NCBI-ProteinID:
XP_038820137
UniProt:
A0A8U0P8D3
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Position
25:complement(1298697..1357225)
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AA seq
411 aa
AA seq
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MAFPSYPVPGLWTLSLLTLLAASVQSNFIVFDDDPMQPVTQDETVSVGGTVTLTCRVAES
DNSSLQWSNTAQQTLYFGEKRALRDNRIQLHRSTGTELSITIGDIQLSDEGEYTCSIFTM
PVRTARATVTVLGVPGKPQISGYEDAVQEGGKVTLTCTSSGSKPPAKLHWYRDQEELTGR
PDVVESNPGEPTYTVISELTLTVGRSDDNALIACAVDHPSLAPGDKGSEQRIRVLFTPDV
TIQPESDLPREGGKFHLQCIANGNPEPISYVWQKKDGELPPLAKVDGSVLRFEMLNKSDN
GMYLCQADNGIGKVQGQYTLLVQDGPDNIADPTAMSTSSGVDHAVIGGVVAVIVFILLCL
LIVLGRYLIRHKGTYLTHEAKGSDDAPDADTAIINAEGGHSGAEDKKEYFI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcattcccttcttacccggtccctggtctatggacgctgagcttattgacactactg
gcagcctctgttcagagcaacttcatcgttttcgacgatgaccccatgcagccggtgacc
caggacgagacggtgtcggtgggcggcacggtgaccctgacctgccgggtggcagagagc
gacaactcctccctgcagtggtccaacacggcccagcagactctgtactttggagagaag
agagctctgagagataaccgtatccagctccaccggtcgacagggacagagctgtccatc
accatcggagacatccagctgtcagacgagggggagtacacctgctccatcttcaccatg
cccgtccgcactgcccgtgccaccgtcactgtgctaggtgtccctggtaagcctcagatc
tctggctatgaggatgctgtgcaggaagggggcaaagtcaccctcacctgcaccagctcc
gggagcaagccccccgccaaactacactggtacagggaccaggaggaactcacaggtcgc
cctgatgtggtggagtctaaccctggtgagccgacctacacggtgatcagtgagctgact
ctgactgtgggccgaagcgacgataatgctctgattgcctgtgctgtagaccacccttct
ctggcccctggggacaaagggagcgagcaacgcattagagtcctgttcaccccagacgta
actatccagcctgagagtgatctacccagagagggaggaaagttccacctgcagtgcatt
gccaacggaaaccctgagcctatctcgtacgtgtggcagaagaaggatggggagctccct
ccgctggccaaggtggatggtagtgtcctgcgctttgagatgctcaacaaatcagacaac
ggcatgtacctttgtcaggccgacaatggcatcgggaaggtgcagggccagtacacactg
ttggtgcaagatggtccagacaacattgcagaccccactgccatgtcgacctcttcggga
gtggaccatgctgtgattggaggagtggtggcggtcatcgtcttcatcctgctctgtctg
ctcatcgtcttgggcagatacctcatcagacacaaagggacatatcttacccacgaggcc
aagggctccgatgacgctcccgacgccgacacggctatcatcaacgccgagggcggccat
tccggagcggaggacaagaaagagtacttcatctag
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