Salvelinus namaycush (lake trout): 120020515
Help
Entry
120020515 CDS
T07522
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120020515
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120020515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-met
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
120020515
NCBI-ProteinID:
XP_038820146
UniProt:
A0A8U0P938
LinkDB
All DBs
Position
Sna25:1800055..1921676
Genome browser
AA seq
1174 aa
AA seq
DB search
MADGPRCKRRKQANPKRNNVTNYNNVVEGQSDSDDEDKLHIVEEDPDGDSTVPDDASVVL
TQNGTETHQDTWDGVKEDCGSEEEEGEEGEEEEGGKDALVEEMLQQGDTAVIYPEAPEDE
QKSMADRRVPDENGTPDALSQLLTCPYCSRGYKRCTALKEHIKLRHEKSEDNFSCSQCSY
TFAYRTQLDRHMTQHKTQHKEPVQRHMPQTTTTTGGNRKFMCTECSKAFKYKHHLKEHLR
IHSGEKPYECPKCKKRFSHSGSYSSHISSKKCVGMVPVNSTPRPVMKASQTPTTQNQLSG
TAPVAPTRLLLRGEKTDGKPLQEQLPVNQIKSEPVEYEYKPVAVGPNGAAGTNGTVFTGG
MAVSQGTALPQGMVQAVVLPTVGLMSPISINLSDLQNVLKVAMDGNVFRQVLGTANGLVT
SKQGVVGQAGQQVISAISLPGFVDQDGTTKIIINYTLEPSLAQQPSAPQLLKKEPPPAPT
TTNTQPASKVTEKLTQALSIIKTEQPDSESEKEMEKDEARAEAEQSKEGETPKAQTGKTT
CLLCDDCPGGLDALHMLQHCKPTNGEGGDGSPLDPSIAALLAEAGITPGQPPLKNLLSLL
KAYFALNAEPTEEELAKISDNVSLPVDIVKKWFEKMQSGQTTAEPPGSSSPLPSTGPSTE
TQAAQEKSGEQTEEQLASAQTQETSSSQPPNSSPASTSASPLVSASAPSPLNLSSSGQVI
VKTEEDSEGESQDLPLDLSLPRQPQSEPQVPHVPQEQPLNLTCLKKETPQLQSQLQAQLQ
AQLQPQLQAQLQAQLPGFQTQLQAQGTTNTIYVTSPSQMATSSPVNIMTTQLVAITNQGS
GVPCLRAISTGTTKRTILIPQLTYTYTTKACSNATGADGAQKTVILNGCQEEEKADTSSE
SVSAVEEQNDSDSAPQQKKMRRLESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGI
CNKAFKHKHHLIEHTRLHSGEKPYRCDKCGKCFSHSGSYSQHMNHRYSYCKKEPQGDHQV
GRRLRMTPETSPRAEEQQSDSRPTSPPSQLDSDERESEEELEEEEGEEEGMEAMSMDDIR
VVQVGEDGEDGEIYEVEEFGEERQEEEEEGSREEEAQQEEEEEEGSREEEAQQEEEEGQQ
EKEEEGRREEEKSVQQEQTFNVALSDVRTSLHGA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggaataacgta
acaaattacaacaatgttgtggagggccagtcagactctgacgatgaggacaagctacac
atagtggaggaggaccctgatggtgacagcacggtgccagacgacgcctcagtagtatta
acccagaacggtacagagacgcaccaagacacctgggatggagtgaaggaggactgtggc
tctgaagaggaggaaggggaagagggggaggaggaggaggggggtaaagatgccctggta
gaggagatgctacagcagggggatacagcggtcatctaccccgaagctccagaggacgag
cagaagagcatggctgatagaagggtcccagacgagaatggcacgccagacgctctttcc
cagctcctgacctgcccgtactgctcgcggggctacaagcgctgcaccgccctgaaggag
cacatcaagctgcgccacgagaagagcgaggacaacttcagctgctcccagtgcagctac
accttcgcctaccgcacacagctggaccgtcatatgacccaacacaagactcaacacaag
gaacctgtacagcgccacatgccccaaaccacgacaacaacaggggggaataggaagttc
atgtgtacagagtgttccaaggcttttaaatacaagcaccacctgaaggagcacctacgt
attcacagcggagagaagccatacgagtgccccaaatgtaagaagaggttttcccactcg
gggtcctacagctcccacatcagcagtaagaagtgtgttggcatggtgcctgtcaacagt
accccccgaccagtcatgaaggcctcccagacccccaccacccagaaccagctttccggc
actgcccccgtagcccctacccgactgctcctccggggggagaagacagatggcaagccc
cttcaggagcagctccccgtcaaccagatcaaatcagagccggtggaatatgagtacaag
ccggtagcggtggggcccaacggggcagcagggactaacgggacagtgtttaccggtggc
atggccgtatcccagggcacggcgctgccacagggcatggtccaagcggtggtactgccc
accgttggtttgatgtctcctatcagtattaatctcagcgacctgcagaacgtactcaag
gtggccatggatgggaacgtgtttcgccaggtgctggggacggccaacgggctggtgacg
tccaagcagggggtggtggggcaggctgggcagcaggtcatctcagccatcagcctccct
ggcttcgtggaccaagacggaaccaccaagatcattattaactacaccctggagcccagc
ttggcccaacagcccagcgcacctcagctcctcaagaaggaacctccccctgcccccacc
accacaaacacacagccagcctccaaagtaacagagaaactcacccaggccctcagcatc
atcaagaccgagcagcccgactctgagtctgagaaggagatggagaaagacgaggctcgg
gccgaggcagagcagagtaaggagggtgaaacaccaaaggcccagacaggcaagacaaca
tgtctgctgtgtgatgactgtcctggtggtttggatgctttgcacatgctccagcactgt
aaacctaccaatggggaggggggtgacggcagccccctggacccctctatcgccgccctg
ctggcagaagcagggataacaccaggccagccccctctgaagaacctgctctccctcctc
aaggcctactttgccttaaacgcagagcccaccgaggaagagctggccaagatctccgac
aacgtcagcttgcccgtggacatagtcaagaaatggtttgagaagatgcagtccggtcag
actactgccgagccccctggttcctcttcccctctaccttcaacaggtcctagcacagag
acccaggcggcccaagagaagagcggcgagcagacagaggagcaactcgcctcggcccaa
acccaggagacatcgtcttcccaacctcccaacagttcccctgcctcgacctccgcctcc
cccttggtctcagcctcggctccctcaccactaaacctctcctccagcggccaggtcatc
gtgaaaacggaggaggactcggagggcgagtctcaagatcttcccctggacctgtccctg
cccaggcagccccaatcagagccccaggtcccccatgtcccccaggagcaacccctcaac
ctcacctgtttgaagaaggaaacgccccagctccagtcccagctccaggcccagctccag
gcgcagctccaaccccagctccaggcccagctccaggcccagctcccagggttccaaacc
cagctccaggctcagggaaccaccaacaccatctacgtcacttccccatcgcagatggcc
acctccagcccggttaatatcatgaccacccagctagtagccatcaccaaccagggcagc
ggcgtgccctgtctcagggccatctccactggcaccaccaaacggactatcctcatcccc
cagcttacctacacatacaccactaaagcatgcagcaacgccactggggccgacggagcc
cagaagaccgtcatactcaacggctgccaggaggaggagaaggctgacaccagttcggag
agcgtgtcggcggtcgaggagcagaacgactcggactcagcccctcagcagaagaagatg
cgtcggctggagagcggcatgtacgcctgtgacctgtgtgacaagatcttccagaagagc
agctccctgctcaggcataaatacgaacacacaggaaaacgtccacacgagtgtggcatc
tgcaacaaagccttcaaacacaagcaccacttgatagagcacacgcgtctgcactccgga
gagaagccctaccggtgtgacaagtgtggcaagtgtttctcccactcgggctcctactcc
cagcacatgaaccaccgatactcatactgcaagaaggagccccaaggagatcatcaggtg
gggcgtcggctcaggatgacccccgaaacgagcccccgagcagaggagcagcagtcagac
agccggcccacctcccctccctcccaactggactcagacgagagggagagtgaggaggag
ctggaggaagaggaaggagaggaggaaggcatggaagccatgagcatggacgacatacgg
gtggtgcaggtgggcgaggacggcgaagacggtgagatctacgaggtggaggagtttgga
gaggagaggcaagaggaggaggaagaagggagcagagaggaggaggcacagcaggaagag
gaggaggaagaagggagcagagaggaggaggcacagcaggaagaggaggagggacagcag
gaaaaggaggaggaagggaggagagaggaagagaagtctgtacagcaggagcagaccttc
aacgtggctctcagtgatgttagaacgagtctccatggagcttag
DBGET
integrated database retrieval system
