Salvelinus namaycush (lake trout): 120020609
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Entry
120020609 CDS
T07522
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120020609
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Protocadherins
120020609
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GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
120020609
NCBI-ProteinID:
XP_038820246
UniProt:
A0A8U0TLQ4
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Position
Sna25:complement(9451947..9455234)
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AA seq
960 aa
AA seq
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MGMRGWNWWVLVCTSLAVLPALTEGKTVKYETFEEDAPATVIGNLAKDISISPSSGSKTN
FRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLIAFDVVSFSKEQFKLIHVEV
EVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGLNYIQSYQISVNSHFTID
VLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGTTRINVKVKDYNDNSPV
FDRNNFSVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGNQVPSEIRQLFRVDRKTGR
LTLESPIDFESKKTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSITAG
IAYITESAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDR
EKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGAYIT
TVVARDMDLGHNGKVSYKLADTYVMGSPVSAFVSLDPASGSFYALRSFNYEVMKQLELRI
TASDGGSPPLTGTATVNIRIVDQNDNAPVINQPVLNNGSAEVLLPRDAPSGYVITQVEAR
DADEGVNAELSYRLASGEASVFSVNKATGEVYLNRMLSHGVDETLRVTVTVSDNGRPALT
TSATLHFLIIAGAPPSDRTVYRAGSREAGEHAQWDLSVVIIIVLAGSCTLLLLAIILIAT
TCNRRKRDKTGDDTDSYGEKETLERGKNNSDNPLLPLHGVGYSTLPGYGNGYNNGKEVVR
PITIWKGNSYTTISARDPAFSGKDSGKGDSDFNDSDSDISGTDLKKEGVPVPPMGGQSGL
WACTSECKILGHSDRCWSPSTVHANTGPSPVPTPTGQTLSSFNSLSKTASLPRDSLRRDN
YYQAHIPKTTGLQSVYEKVLHREYDYVLVTPPIPMRVQEISEITIPVYGPTTTRCPSNEV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgagagggtggaattggtgggtgctggtgtgcacctcactggctgtcctgccc
gctctcacggagggaaagacagtgaagtatgagacatttgaggaggacgccccggcgact
gtcatcggaaacttggccaaggacatttcaatcagcccctcctcgggctccaagacaaat
ttcaggatgatgaagcagttcaactcgtcttttatccgtttgagggagagcgacggacag
ctgactatcggagagagaattgacagagagagaatttgcaaacacacccttcactgcctc
atcgcatttgatgtggtcagcttctccaaagagcagttcaaactcatccacgtcgaggtg
gaggtcaaggacatcaacgacaattcccccgagttcccccggaaagagtcgagtctggag
atctccgaaaacacagccgtgggcacgcggatcccgttagacttcgctgtggatgaggac
gtgggtttgaattacatccagagctaccagatatccgttaacagtcacttcaccatagat
gtgctcagcagagccgacggggttaaatatgcggagcttgtgctcatgaaggagctggac
cgtgagacacaggcttcctatgcgctcgagctggttgctatggatggtggcaacccgtcc
cgcacgggaacgactcgcatcaacgtcaaggtgaaagactacaatgacaacagcccggtg
tttgacaggaacaatttctcagtcgacctccctgaggacgcaccggtagggtttctctta
ctggacctgaacgcagaagacccggatgaggggctgaatggggaggtggtgtatgggttc
ggtaaccaggtgccatcagagattcgacaacttttcagagtggaccgcaaaacgggacgc
ctcactctcgagagccccattgactttgaaagcaaaaaaacgtatgaatttgacgtccag
gcgactgacctgggtccaaacccgagcccggctatctgtaagatagtggtgcaggtgcag
gacgttaacgacaacgcgccagagatctccatcacgcctatgacctccatcacggcggga
atcgcctatatcacggagtctgcggcacgcgagagttttgttgctctggtcagcacctcg
gacagggactctggtgctaacggacaggtgcactgcacgctctacggccacgaccacttc
aggttgcagcaggcgtacgaggacagcttcatgatcgtgagcacgagcccgttggaccgg
gagaaaatccctgagtataatctaacagtggtggcagaggacttgggatccccacctttc
agaaccatcacccagtacaccatccggttaacggacgagaatgacaatgcccctgtgttc
agtaagccggtgtatgaagtggctgtggtggagaataacgcaccaggtgcttacatcacc
acggtggtcgccagggacatggacttgggccacaacggtaaggtgagctacaagctcgct
gacacctatgtcatgggctctccggtgtctgcttttgtctcactggaccccgcgagtggc
tccttttatgcactcaggagcttcaactatgaagtcatgaaacagctcgagctgcgcatc
acagccagcgacggtgggtccccgcccctcaccggaaccgcgaccgttaacattaggata
gtggaccaaaacgacaacgcacctgtcatcaaccagcccgtgctcaataatgggtccgct
gaggttctgctgccccgggatgcgccctcaggctacgtcatcacccaggtggaggcgcga
gatgctgatgagggcgtgaacgcggagctgtcctacagactggcatctggagaggcatcc
gtgttctccgttaacaaagccaccggagaggtctacctcaaccgcatgctcagtcacggc
gtggacgagaccctgcgtgtgaccgtcacggtgagtgacaacgggagacctgcgctcacc
acctccgccacgcttcacttcctcatcattgcgggcgcccctccgagcgacaggaccgtg
taccgggccggcagcagggaggcaggggagcacgcacagtgggacctgtcagtggtgatt
atcatcgtcctcgcggggagctgcacgctcctgctgttagccatcatcctcatcgccacc
acctgcaaccggcggaaacgggacaagactggagatgacacagactcgtacggggagaag
gagactctggaaagaggcaaaaacaacagcgacaacccgctgctgccgctccacggagtc
ggctactccactctgcccggctacggaaacggctacaataacggtaaagaagtggtcaga
ccaatcaccatctggaagggcaactcctacaccaccatctccgcaagagaccccgcattc
agcgggaaggacagcgggaaaggcgacagtgactttaacgacagcgatagtgacatcagt
ggcaccgacctgaagaaggagggagtaccggtaccccccatgggcggccagagtggtcta
tgggcgtgtaccagtgagtgtaagattctgggtcactctgaccgctgctggagcccttcc
actgtacacgctaacaccggtccctcgcccgtccccacccctaccggccagaccctctcc
tccttcaacagtctttccaagacggcctcgctgccccgagactcgctccggcgggacaat
tattaccaggcgcacatccccaaaacaaccggcctgcagagtgtgtatgagaaggttctg
catagagaatatgactatgtcctggtcactcctcccatacccatgagagttcaggagatt
agtgaaatcactatcccagtctacggtccgaccacgacacggtgtcccagcaatgaagtc
taa
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