Salvelinus namaycush (lake trout): 120020611
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Entry
120020611 CDS
T07522
Symbol
thoc7
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120020611 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120020611 (thoc7)
03041 Spliceosome [BR:
snh03041
]
120020611 (thoc7)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120020611 (thoc7)
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120020611 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Motif
Other DBs
NCBI-GeneID:
120020611
NCBI-ProteinID:
XP_038820252
UniProt:
A0A8U0P9D7
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All DBs
Position
Sna2:complement(19698958..19703944)
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AA seq
195 aa
AA seq
DB search
MNNRCECEVVKVLIGNVAYLSITDKVIWKRLLIDGDNQSINVLLKNFTKWCNSTGLPEEG
FTQYQRMXGTXAQCQFSMGKTLLVYDMNLWEMENDEKIYTDIKQNITSAHDTXSEXQKEI
QRAKKIQNNQQEYDALAKVIQQHPDHHGTLKXXQCGHFFLDKELHQLSHIKENVGNKLEL
RKKQFHVLLCTIQEL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccggtgtgaatgtgaggtggtcaaagtgctcattggtaacgttgcttactta
tccattacagacaaagttatttggaaacgtcttctcattgatggagacaaccaaagtatc
aatgttcttttgaagaactttactaaatggtgcaattcaactgggttgcctgaagaagga
tttacacagtaccagaggatgtagggtacataggcacaatgtcaattctcaatggggaag
accttgctggtgtatgacatgaacctctgggaaatggaaaacgatgagaaaatatacact
gacataaaacaaaacataacatcagcacatgatacanaatcagaatgacaaaaggagatc
cagagggcaaagaaaatccaaaataatcagcaagagtatgatgcactggcaaaggtcatc
cagcaacatccagatcaccatggaacattaaagtgataacaatgtggacatttctttctt
gacaaagagcttcaccagctgtcccacatcaaagagaatgtgggaaataagctggaattg
aggaagaaacagttccatgtgctcctctgtaccatccaggaactataa
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