Salvelinus namaycush (lake trout): 120020635
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Entry
120020635 CDS
T07522
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4-like
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04148
Efferocytosis
snh04218
Cellular senescence
snh04310
Wnt signaling pathway
snh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120020635
04020 Calcium signaling pathway
120020635
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120020635
09143 Cell growth and death
04218 Cellular senescence
120020635
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120020635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120020635
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
120020635
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Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
120020635
NCBI-ProteinID:
XP_038820273
UniProt:
A0A8U0P7X9
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Position
Sna25:10618227..10624414
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AA seq
778 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPRQLRGPSPLRNADQEHTIAGERTDSSLSLPTSSNT
DSHLAATHVGQPISITTPPSSSASQRAGMHSPPPRRALVREFSGTYESLPARSVQVSESR
VLECPSIQITTISPEDDTAPAGSNYWDTGGGWERERLYLPLLDPFCYRDGGTGTGSLSPS
PASSPSSRGWLSPASSCDSLLVEEEDLNEATSHFCLSPSSRPTSPGGKKRRNSPLASPCT
SRRSSYSDEHSCNQEEGDSTSQSQGPNSSFELSIPQKTRKTSLEQVSPREVEQGQAPAHS
SHCPLPEPLQQREAPSMGMDYLSVPPALGWGRTRASTHSPLFRSNALPPLDWPLPTQFDQ
YELRIEVQPRPHHRAHYETEGSRGAVKASPGGHPVVKLTGYTERQPLSLQVFVGTADDRS
IRPHPFYQIHRVTGKMVGTASQESVQAGTKILDIPLNPDTNMTALIDCAGILKLRNSDIE
LRKGETDVGRKNTRVRLVFRTHLPLAPPVAPPGRVLALQVASLPIECSQRSAQELPVVES
VSLTSCSVEGGEELLLGGSNFLPMSRVLFMERGTDGKLQWEEEAHVDRDNSSECLLCVRV
PAYSDLSVSRPVSVCLYVSNGKRKRSSTHCFKYLPVMFKEEDPLLSHPSALPLEGVTLCS
MRRPSRVDSGVHRGNDPMLEEGGLAFHLPPYPSACSPPYPGQSYQEYCHKPEAVEESRGS
LSERHPSFENLELGFTELLPPFYPRVPQPPSPSPWLDSPYLSSSPSPSHSSSLSPFPS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggttcgggctgggaggagggggagttcgagttcaagttggttttt
gaggaggacccgccgcgccaactccggggcccatccccgctgcgcaacgcggaccaggag
cacaccatcgcaggggagaggacagatagctccctgtcactcccaacgtcgagcaatact
gacagccacctggctgccactcatgtaggccagccaatcagcatcactaccccaccgtct
tcttcagccagtcaaagggctgggatgcattccccgccccccagacgtgccttggtgagg
gagttcagcgggacttatgagagtcttccagcgcgatctgtacaagtctcagagtcccgt
gtgttggagtgccctagcatccagatcactactatctctccagaggatgacactgcccca
gcaggaagtaactactgggacacaggaggtggctgggagagggagcgcctatacctcccc
ctactggacccattctgctaccgcgacggcggcaccggcactgggtccctgagcccaagc
cctgcctccagcccctcttctcgcggctggctcagtcctgcgtccagctgcgattcgctg
ctagtagaggaggaggatctcaatgaggccacttcccatttctgcctgtctccctcctcc
cggccaacctccccggggggtaagaagcgcaggaactcccccctggcctccccctgcacc
tcccgcaggagcagctactctgacgaacactcttgtaaccaggaggaaggagactccacc
tctcagtcacagggtcccaacagcagctttgagctgagcatcccacagaagaccaggaag
acatcactggagcaggtttcccccagggaggtggagcaaggtcaggctccagcccatagc
tcccactgcccactcccagagccgctgcagcagagagaggccccctccatgggcatggac
tacctgtctgtgccccctgctctgggctgggggaggaccagagccagcacccacagccct
ctgttcagatccaatgctctgccaccacttgattggcctctgccaactcagtttgaccaa
tatgaactgcgtatcgaggtgcagccccgcccacaccaccgagcccactacgagacggag
ggaagcagaggagccgtcaaggcatcaccagggggacatccggttgttaagctgactggg
tacacagagagacagccgctctcattgcaggtgtttgtgggaacagctgatgacaggtcc
atccggcctcaccctttctatcagattcacagggtgacaggaaagatggtgggcactgcc
agtcaggagagcgtccaagctggcaccaaaatactggatatccccctcaacccagatacc
aacatgactgcgctcattgactgtgctggcattctgaagctgaggaactcggacatcgag
ctgaggaaaggagagacggacgtagggaggaagaacacgcgtgtgcgcctagtgttccgt
acccacctccccctggcccctcccgtggccccgcctggacgggtgctggccctgcaggtc
gcctcccttcctatagagtgctcccagcgctctgctcaggagctgccagtggtggagtcg
gtcagtcttacatcctgctctgtggaaggaggggaggagctactgttgggtgggtctaac
ttcctgcccatgtccagagtgctttttatggaaagagggacagatggaaagctacagtgg
gaagaggaggcacatgttgaccgtgacaacagtagtgagtgcttgctgtgtgtgcgagtt
ccagcctatagcgacctctcagtgagccgcccagtatctgtgtgcctttacgtctccaac
gggaagaggaaaaggagcagcactcactgtttcaagtacctgccggtcatgtttaaagag
gaggaccctctgctgtcgcatccctctgccttgcccctggagggggtgacactctgctcc
atgaggaggcccagcagggtggacagcggtgtgcaccgggggaatgatcccatgcttgag
gagggaggactggccttccaccttcccccctacccttcagcctgctctcccccctacccc
ggccagagctaccaggagtactgccacaagccggaagctgtggaggagagcagaggttct
ctgtcggagagacaccccagctttgagaacttggagctgggcttcactgagctactgcct
cccttttaccccagagtcccccagcctccctccccctccccttggctggactccccatac
ctgtcctcttccccctctccctcccactcctcctctctgagtcccttcccctcc
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