Salvelinus namaycush (lake trout): 120020680
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Entry
120020680 CDS
T07522
Name
(RefSeq) far upstream element-binding protein 1-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120020680
03041 Spliceosome [BR:
snh03041
]
120020680
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120020680
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120020680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
FUBP_C
Motif
Other DBs
NCBI-GeneID:
120020680
NCBI-ProteinID:
XP_038820310
UniProt:
A0A8U0TLD4
LinkDB
All DBs
Position
Sna25:35965723..35994387
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AA seq
670 aa
AA seq
DB search
MADYSNVAPPSGNGAGMNDAFKDALQRARQIAAKIGGDGVPSAAPSGSEFGYGGQKRPLE
DAGEYDQPETKKVAPNDSFSAAMGGGGMGGGGMGGGGMGGGGARSLSEEFKVPDGMVGFI
IGRGGEQISRMQQESSCKIQIAPDSGGMPDRSVTLTGSPDSIQAAKRLLSEIVDKGRPAP
AFHHNDAGGPGMSVQEMLVPASKAGLVIGKGGETIKQLQERAGVKMVMIQEGPQNTGADK
PLRISGEPFKVQQAKDMVMELIREQGFREQRGEYGSRMGGGGGGGGGGGGGGGGGGGGGG
EGLDVPVPRFAVGIVIGRNGEMIKKIQSDTGVRIQFKPDDGTTPERIAQIIGPPDQSQHA
AEIITDLLRSVQQGGPGGPNGGGRGRGRGGNGGGNWNMGPPGGLQEFTFTVPTMKTGLII
GKGGETIKGISQQSGARIELQRNPPPNSDPNIKMFTVRGSHQQIDYARQLVEEKIGGPVS
PMGGPHGPPGPHGGPSPHGPPGPPGPPAQMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNG
FPHWQQGQPDPGKAAADANAAAWAAYYSQYQQQPQAPMTPAGGAPGNTQANGQGQQPQDY
TKAWEEYYKKQGQAAPQAAAGQPGGQPGGQPGGQPDYSAAWAEYYRQQAAYYGQGSPQAM
GAQPQAPQGQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctgactattcaaacgtggctccgccgtcgggaaatggcgcaggaatgaacgacgct
tttaaagacgcacttcagcgagctagacagattgcggcaaagattgggggggacggcgta
ccgtccgcggcgccctcaggcagtgagtttggctatggaggccagaagcgaccccttgaa
gatgccggtgagtacgaccaaccagagaccaagaaggtggcacctaatgactcgttctca
gcagcaatgggaggtggaggaatgggaggtggaggaatgggaggtggaggaatgggaggt
ggtggagcacgatcgttgtcggaggagttcaaggttcctgacggaatggttggattcatt
attggaagaggaggagaacagatatcccggatgcaacaggagtccagctgtaaaatccag
atcgcccccgacagtggaggtatgcctgataggtcggtgacactgactggatccccagac
tccatacaagctgccaagaggctgttgtcggagattgttgataagggtcgtcctgctcca
gccttccatcacaacgacgccggcggccccggtatgtctgttcaggagatgctggtccct
gcctccaaggctggcctggtcatcgggaagggaggagagaccatcaaacagctgcaggag
agagccggggtcaagatggtgatgatccaggaagggcctcagaacacgggagcagacaaa
cctctacgcatctctggggaaccttttaaagtccagcaagccaaagacatggtgatggag
ctgatcagagaacagggcttcagggagcagagaggagagtacggctccaggatgggagga
ggtggaggaggaggaggaggaggaggcggcggcggcggcggaggaggaggaggaggagga
gagggcttggatgttcctgtccccaggtttgcggtaggaattgtgatcgggagaaacgga
gagatgatcaagaagatccagagcgacacaggagtcaggatccagttcaaaccagatgac
ggcactaccccggagaggatagcccagatcataggtcctccagaccagtcccagcatgca
gcagagatcatcactgaccttctgaggagtgtccagcagggggggccgggcggtcctaac
ggagggggcagggggagaggcagggggggtaacggggggggtaactggaacatgggtcct
cctggtggactgcaggagttcaccttcaccgtcccgaccatgaagactggactcatcatc
ggcaaaggaggagagaccatcaagggcatcagccagcagtctggggcgcgtatcgagctc
cagagaaaccctccgcccaactccgaccccaacattaaaatgttcaccgtccgaggatca
caccaacagatagactacgcacggcagctggtcgaggagaagatcgggggtccagtcagt
ccaatgggtggtcctcatggcccaccaggcccccacggaggtccctctccccacgggccc
cccggaccacctggacctcctgctcagatgggcccctacaaccccggcccttacaaccag
ggacccccaggaccacatggtcctcccgctccctaccagcctcagggttggggcaacgga
ttcccccactggcagcagggacagccggatcctggtaaagccgcggctgacgccaacgcg
gcggcctgggcagcgtattactcccagtaccagcagcaaccccaggcccctatgacgccc
gccggcggagccccaggcaacacgcaggccaatgggcaaggtcagcaaccacaggactac
accaaggcctgggaggagtactacaagaaacaaggtcaagcggccccccaggcagcagca
ggtcagccaggtggtcagccaggtggtcaaccaggtggtcaaccagactacagtgctgcc
tgggcagagtactaccgccagcaggctgcgtactacggacagggaagcccacaggccatg
ggagcccagccacaagcacctcagggccagtaa
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