Salvelinus namaycush (lake trout): 120020687
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Entry
120020687 CDS
T07522
Name
(RefSeq) alpha-amylase-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00500
Starch and sucrose metabolism
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120020687
Enzymes [BR:
snh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
120020687
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Gene cluster
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Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
120020687
NCBI-ProteinID:
XP_038820321
UniProt:
A0A8U0P8M1
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Position
Sna25:complement(36682365..36698508)
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AA seq
506 aa
AA seq
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MMRYLVLLALLGLSKAFNNPHAKHGRQAIVHLFEWKWNDIAAECERFLAPKGYAGVQISP
PTESILLTSPWRPWWERYQPISYNLCSRSGNESELRDMITRCNNVGVNIYVDAVINHMCG
AGGGEGTHSTCGTYFSAKNRDFPSIPFSGFDFNEGKCKSASGDIENYNDINQVRDCRLVS
LLDLALEKDYVRGKVADYMNNLIDMGVAGFRVDASKHMWPGDLTVIYGSLHNLNTRWFNG
GARPFMFQEVIDMGGEAIQASDYFPLGRVTEFKYGAKIGNVFRKWNGEKLSYTKNWGEGW
GFMPDGNALVFIDNHDNQRGHGGGGSAILTFWDARIYKMAVAYMLAHPYGVARVMSSFRW
NRADDWQGPPSHEDGSTKDVQVNADDTCGDGWVCEHRWRQITNMATFRNVVDGQPHSNWW
DNGNNQVAFGRGNRGFIVFNNDDWHLDVTLNTGMPGGTYCDVISGQRDGERCTGKTINVG
DDGRAHFKISNTEEDPMVAIHADSKL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggtatctagttctgttggccctgctggggctgagcaaggctttcaacaacccc
catgccaagcacggcaggcaggccatcgtccacctgtttgagtggaagtggaacgacatc
gcggctgagtgtgagaggttcctggctcccaaaggatacgctggagttcagatctcccct
cctactgagagcattttgttgaccagcccgtggagaccatggtgggagcggtaccagcca
atcagctacaacctgtgttccagatcaggaaatgagagcgagctcagagacatgattacc
agatgcaacaacgttggggttaacatctacgttgatgccgtcatcaaccacatgtgtgga
gctggaggcggagagggaacccactctacctgtggaacctatttcagtgccaaaaatagg
gacttcccttccatccccttcagtggctttgatttcaacgaaggaaagtgcaaatctgcc
agcggagacatcgagaattacaatgatatcaaccaggtgcgtgattgtcgtctggtgagt
ctgctggatcttgccctggagaaggactacgtcagaggaaaggtggccgactacatgaac
aatctgatcgacatgggagtggctgggttcagagtggacgccagtaaacacatgtggccc
ggcgaccttactgtcatctacggaagtctccacaacctcaacacccgctggttcaatggg
ggagccagacccttcatgttccaggaggttatcgacatgggtggtgaggccatccaggcc
tcagattacttccccctaggcagagtcactgagttcaaatatggagccaaaatcggaaac
gtcttccgcaagtggaacggcgaaaagctgtcttacaccaagaactggggtgaaggctgg
ggcttcatgcccgacggcaatgctcttgtgtttattgataaccatgacaaccagagaggt
catggaggaggtggaagcgccatactcaccttctgggacgccaggatttacaagatggcc
gtggcctacatgcttgcccatccctacggggtggcccgtgtgatgtcctccttccgctgg
aaccgtgctgatgactggcagggccctcccagccacgaagatggatccaccaaggatgtc
caagtaaacgctgacgacacctgtggagacggatgggtgtgtgagcacaggtggcgccag
attacgaacatggctaccttccgtaacgtggtggatggacagccccattccaactggtgg
gataatgggaacaaccaggtggcctttggacgcggcaaccgtggcttcattgtcttcaac
aacgatgactggcacctggatgtgactctgaacactggcatgcccggcggcacctactgt
gatgtcatttctggccagagggacggagagcgctgcacggggaagaccatcaatgttggg
gacgatggtcgcgcccacttcaagatcagcaacaccgaagaggatcccatggtggcgata
catgctgactccaagctgtaa
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