Salvelinus namaycush (lake trout): 120020708
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Entry
120020708 CDS
T07522
Name
(RefSeq) nucleolar transcription factor 1-A-like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120020708
03021 Transcription machinery [BR:
snh03021
]
120020708
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
120020708
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
120020708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120020708
NCBI-ProteinID:
XP_038820353
UniProt:
A0A8U0PAP4
LinkDB
All DBs
Position
Sna25:complement(38862520..38881058)
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AA seq
720 aa
AA seq
DB search
MNGSSSVSSASQTIQIKTEPVVDTWSKEDCLTLLERIRSLLPDGDAMKYKTTESHFDWEK
VCFGGFTGDMCKQKWAKVSTEVRKFRTMTELIVDAIEFVKNPYKGKKLKTHPDFPKKPLT
PYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKQKYITEFQREKESFEKNMA
RFKEDYPELIEERKKSDLPEKPKTPQQLWYNHEKKTYMKLHPDVSQKELKEALRRQWSQL
SDKKRLKWISKALELQKDYAGCMRVYQEAHPDAEEHVKSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPSTERMVLCSKQWKVMTQKEKDMFQKRCEQKKKQYEIDLQRF
LESLPEEERDRVMTEEKLGGSRLGMGGVGSPHRSKSPSAKVGLTKLQQERCREAEQGHWV
HSGLTAKEKRDGKKRTKLPETPKTAEEMWQQGVVGDYLAKFRSDRKKTQSAMESAWKAME
KKEKIPWIKKAAEDQKRYEVQYRPVRELLEMRTAQAGAGQRKPKFEGEPRKPPVSGYQMF
SQELLTNGELNHFSLKERMVEIGKRWHKLSQSHKDKYKKLVEELQIEYKAELEAWVKSLS
PQERAVYKEFSTTKRRSTTKARGGPGAKVRVTAVKGKAVGARAAAAGVGGGKRAMAYRAK
QDTSDSDDDDKTDSSDSDDDEESSGSSDSEDDNDDDHDDDDQSEGSSSSSSEDSSDSDTD
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcagcagtgtgtcctctgcctcccagaccatccagatcaaaacagaacca
gttgtggatacatggagtaaggaggactgcctcactcttttggagagaattcggagcctg
ttgcctgatggtgatgccatgaaatacaagaccaccgagtcccactttgactgggagaag
gtctgcttcggaggcttcaccggcgacatgtgcaaacagaagtgggcgaaggtgtccacc
gaggtgcggaagtttaggactatgaccgagctcatagttgatgccattgagtttgtgaag
aacccatacaaagggaagaaattgaagacacacccagacttcccaaagaaaccccttaca
ccgtatttccggttcttcatggagaagcgagccaagtatgccaagatccacccggagatg
agcaaccttgacctcaccaagattctgtccaagaaatacaaggaactcccagaaaagaaa
aagcaaaagtacatcacagagtttcagcgagagaaggagtcctttgagaaaaatatggcc
cgattcaaagaggactacccggagttgatagaggaaagaaagaagtcggacctccctgag
aagcccaagacgccccagcagctgtggtacaaccacgagaagaagacatacatgaagctc
caccctgatgtgagccagaaggagctgaaggaagctctgaggagacagtggtcccagctg
tcagacaagaagagacttaagtggatcagcaaggccctggagctgcagaaagactatgcg
ggttgtatgagagtctaccaagaggcccatccagacgctgaagagcacgtcaagtccgtc
ctcaccaaagccgagcggcagctcaaggacaagttcgacggcaggccaaccaaaccaccg
ccgaacggttactccctatactgtgccgagctgatggtgaacatgaaggatgttcccagt
acggagcgtatggtgctgtgcagtaagcagtggaaggtgatgacgcagaaggagaaggac
atgtttcagaaacgttgcgagcagaaaaagaagcagtacgaaattgacctacagaggttt
ctcgagagtctcccggaggaggagagggaccgagtgatgacggaggagaagctgggtggc
tcgcggctgggcatggggggtgttggcagccctcacagatccaagtccccgtccgccaag
gtgggtctcacaaaactacaacaggagcgctgtcgcgaagctgagcaggggcactgggta
cactccggcctgacggcgaaagagaagcgcgatggcaagaagaggaccaaactccctgag
acacccaagactgccgaggagatgtggcaacaaggcgtcgtaggagactacctggccaag
ttcaggagtgaccgtaagaagacccagagtgccatggagtcagcctggaaggccatggag
aagaaggagaagatcccttggatcaaaaaggcggctgaagaccagaagcgatacgaggtt
cagtaccggcccgtgagggaattgttagagatgagaacagcccaggcaggagcaggccag
aggaaacccaagtttgaaggggagcccaggaagccacctgtgagtggctaccagatgttc
tcccaggagttgctgaccaatggcgagctgaatcacttcagcctgaaggagcggatggtg
gagatcggcaagcgctggcacaagctcagccagagtcacaaggacaagtacaagaagttg
gtggaggaactgcagattgagtacaaggccgagctggaggcctgggtcaagtctctctct
ccccaggagcgagcggtttataaagagttctccaccacgaaacggcggagcaccaccaag
gcgcgggggggcccgggggctaaggttcgcgtgactgcagtgaaggggaaggcggtaggt
gccagagccgcagcagcaggggtcggggggggcaagcgggccatggcgtaccgggccaag
caggatacgtccgactcagacgacgatgacaagacggactcgtcagactccgacgacgac
gaagaatcatccggcagctccgacagcgaagatgataatgacgatgaccatgatgatgac
gaccaatctgagggctccagcagctcttcctcagaggacagcagtgactcagacacagac
tag
DBGET
integrated database retrieval system
