Salvelinus namaycush (lake trout): 120020760
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Entry
120020760 CDS
T07522
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120020760 (pif1)
03029 Mitochondrial biogenesis [BR:
snh03029
]
120020760 (pif1)
Enzymes [BR:
snh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120020760 (pif1)
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120020760 (pif1)
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
120020760 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
UvrD_C_2
AAA_22
DEAD
Herpes_Helicase
Mg_chelatase
ABC_tran
AAA_16
RsgA_GTPase
AAA_7
PhoH
AAA_5
Motif
Other DBs
NCBI-GeneID:
120020760
NCBI-ProteinID:
XP_038820430
UniProt:
A0A8U0TLH4
LinkDB
All DBs
Position
Sna25:32244163..32254007
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AA seq
638 aa
AA seq
DB search
MFQGDDGAQLQCTVVVERLNSSGQATKRQVIRKAAVLLGRNEFQEIIMRVHDGKVVPQSY
TLKEFQLFTRFAKDGKCTVKLLPENIQVLFSDCPPHLLNIFLKTLSIKHQAWQTSKPMTD
REKLKACLPRSFETISPLQQKDVQKASELRSKVNAPGLSKGLVVRTGNERTGGQQVKRQR
TDCDSSPLKALHPSKKPTLSLPTARKLNTEQAAVLSAVLSGKNVFFTGSAGTGKSFLLKR
IVGSLPPKSTYATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTSC
RHLIIDEISMVEAQFFDKLEAIARSLRRSTEPFGGIHLIVCGDFHQLPPVSKGKDKAMFC
FQSRSWRKCIHLNMELTEVRRQSDQSFISLLQAVRVGRVTEEFTAKLMKSAYHKIERDGI
LATRLCTHKDDVELTNDNKLQQLPGSVRVFEAVDSDPALVKTIDSQSPVSRLLELKVGAQ
VMLTKNLDVQRGLVNGARGVVVDFQPSKLGLPRVRFLCGTTEALKPERWMFKAGGGLYLS
RQQLPLKLAWAISIHKSQGMTLDCVEISLARVFERGQAYVALSRAKSLEGLRVMDFDPHV
VRADPDVLHFYSKLRKERLLLQASMNEFVGKSNKENCW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaggggacgacggtgcccagctccagtgcactgtcgtggtggagcgcctgaac
tcctctggccaggccaccaaacgccaagtcatccggaaggcagctgttcttctcggtcgc
aacgagttccaggagataattatgcgcgtgcacgacggtaaagtcgtgccccaaagttac
acgctcaaagagttccagctttttacccggtttgccaaggatggcaagtgcaccgtcaaa
ctgctccccgaaaacatccaagtgctcttctctgactgcccgccccacctactaaacatt
ttcctgaagaccttgagtataaaacaccaggcctggcagactagcaaacctatgacagac
cgagagaagctgaaagcctgtctgccccgcagcttcgagaccatcagcccattacagcag
aaggatgtacagaaggccagtgagctgaggagtaaagtgaacgcgccagggctctctaaa
ggtctggtagtgaggactggtaatgagagaactggaggacagcaggttaagagacaaagg
acggactgtgactctagtccattgaaggcactccacccaagcaaaaagcccaccctgtct
ctaccaacggcacggaagttgaacacagaacaagctgctgtcctcagtgctgtgttgagt
gggaagaatgttttcttcactggcagtgcaggcacagggaagtccttcctgttgaagagg
attgtgggctcgctgccgcccaaaagcacctacgccacggccagcacgggcgtagcggcg
tgtcacatcggggggaccacgctacacaactttgctggtatcgggtcaggctcagcccct
ctggagcagtgtatagagctggcccagaggcccggggtcctgcagcactggactagctgt
cgccacctcatcatcgacgagatctccatggttgaggcccagtttttcgacaagctggag
gccatagccaggtctctgaggaggtccacagagccgtttgggggaatccatctgatagtg
tgtggggacttccaccagctgcccccggtctccaagggaaaggacaaggccatgttctgc
ttccagtctagaagctggcggaagtgcatccatctgaacatggagctgactgaggtgcgc
agacagtctgaccagtctttcatctccctcctgcaggcagtgagggtgggcagagtcaca
gaggaattcactgccaagttgatgaagagcgcctatcacaagatcgagcgggatggtatc
ctggcaaccaggctttgcactcacaaggacgacgtagagctcactaacgacaacaagctc
caacagctgccagggtcagtgcgggtgtttgaggctgtggacagcgaccctgcactggtg
aagaccatagacagccagagtcccgtcagcaggctgctggagcttaaagtgggcgctcag
gtcatgctaacaaagaacctggacgtccagcgtgggctggtcaacggggctcgaggtgtc
gtagtggactttcagccgtcgaaactagggctcccacgtgtgcgtttcctgtgtggcact
actgaagcgttgaagccagagcgctggatgttcaaggccggaggcgggctctatctgagc
cgccagcagctgccactcaaactggcctgggccatctccatccacaagagccagggcatg
acgctggactgtgtggagatctccctggcgcgggtgtttgagaggggccaggcctatgtg
gcgctgtctcgggccaagagcctggaggggctaagggtcatggactttgacccccatgtg
gtccgtgccgaccccgacgtgctgcacttctacagcaagctgaggaaagagaggctactg
ttgcaggcttcaatgaatgagtttgtgggcaaaagtaacaaggagaactgttggtga
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