Salvelinus namaycush (lake trout): 120020921
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Entry
120020921 CDS
T07522
Symbol
fcho2
Name
(RefSeq) F-BAR domain only protein 2 isoform X1
KO
K20042
F-BAR domain only protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120020921 (fcho2)
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120020921 (fcho2)
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
120020921 (fcho2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
muHD
GMIP-like_FCH
FCH
Leu_zip
Beta-prop_WDR75_2nd
DUF1664
Motif
Other DBs
NCBI-GeneID:
120020921
NCBI-ProteinID:
XP_038820483
UniProt:
A0A8U0P8B6
LinkDB
All DBs
Position
Sna26:5555699..5651179
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AA seq
1078 aa
AA seq
DB search
MITPYFLENFWGDKNNGFDVLYHNMKHGQISSKELTDFIRERATIEEVYARSMTKLAKSA
GNFSQLGTFAPVWDVFKTSTEKLASCHLELVRKLQELIKDVQKYVDDQAKVHKKTKEEVA
STNGAVQAIQTTGVALQKSKENYNAKTVDQERLRKEGATQREVDKAGVKAKKATEAYKGL
VEKYATAKSEFEQKMAETAQKFQNIEESHIVHMKDIIQSYAQSVDETHVQIGEVHTEFLG
NMENTSVEGLIQKLAESKGTGKERPGPIEFEECNTAIATEGAKPRKRKTYAFPGRRKDNK
DTDSTESTEVEPANNANGAPPGYYGTIDFQNANVPTVDEDGFCIRPEDRNENDAKDNSFY
SSSDSEDEDEPRKFRVEIKPVAPNNGTHQSRASIDELKASIGNISLSPPNAGQMRRNQSS
DELGKTRIPASFNDSRPAFNNDLLSLDPFGPTLGGSSSSTAEVILQRELSSPPLAGSLQT
KGEVTPSLASTTTNTFSPWEASPDDPFLALKPIPARAQSAPITRQAEPPDPQDPTPTPAA
PARLPRGEDQSAFSWSQSQWIAFNDDFVPFRRQQSCGPGTGTGPVSHDRTQSNPPTSRTQ
SNPPIDRVQSGRSIRFFSEDPADPYNKMPLSSGVVEDSASCVSEVLSALTEGMVASAASQ
TNNVPALARPTTPLAGALVPPPRPSSRPKLPTGKLTGITEIVRPFSPPKTLSNASLPLAA
PLARAESSSSLSSTASLSASNTPTVGPERTFRLSRSSPEPEFLLSPSPLFLLSQKDDGFI
GKLPTFEKRCETPAGTSRGPSPVTLASQDALPIAVAFTESVNAYFKGADPTKCIVKITGD
MTLSFPMGIIKVFTSNPSPAVLTFKLKSTSKLEQILPNQTLLFSDPSQSDTNTKDFWFNM
QALTSYLRKASEQNPAASYYNVDILKYQVSSNGIQSTPLNLAVYWKCTPTTTDLRLDYRY
NPESMLCPGPLSNVQVLVPVDGEVINMQSLPNAVWNSELNKSLWKLSDISEKSDNEGSGS
LRAKFELSDGPSTPTTLAVQFMSEGSTLSGVDMELLGAGYRLSLNKKRFATGRYMADC
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgataacgccctacttcctagagaatttctggggcgataaaaacaatggatttgatgtt
ctctaccataacatgaagcatggccaaatctcctccaaggaacttactgatttcatcaga
gaaagggctaccatagaagaggtctatgccaggtcaatgaccaaacttgccaagtcagct
ggcaacttctctcagcttgggacgtttgccccggtgtgggatgtgtttaagacgtccaca
gagaagctggccagctgccacctggagctagtgaggaagctacaggagcttatcaaagac
gtgcagaagtacgtggacgaccaggccaaggtccacaagaagacgaaggaagaggtggcg
tccactaacggggcagtacaggccatccagacaaccggggtggccttacagaagtccaag
gagaactacaacgccaaaactgtggatcaggagagactccgcaaggagggagccacacag
agagaagtggacaaggcgggagtgaaggccaagaaagccacagaagcctacaagggcctc
gtggagaaatacgccacagccaagtccgagtttgaacagaagatggctgaaactgcgcag
aaatttcagaacatcgaggagagccacatcgttcacatgaaggatatcattcagtcgtac
gcacagtctgttgacgaaacacacgttcagatcggagaagtccatacagagtttttgggg
aacatggagaacacctctgtggagggtttgatacagaaactggctgaaagtaaaggaacg
ggcaaagagagaccaggtcctattgagtttgaggagtgcaacactgccatcgccactgaa
ggagccaaacccaggaagagaaaaacatatgcgttccctggccgccggaaagacaacaag
gacacagactccacggagtcgacagaagttgaacctgctaataatgccaacggagctcct
cctgggtactatggcaccatagacttccagaacgctaatgtccccacggttgacgaagat
ggcttctgtatcagaccggaagaccgcaacgaaaatgatgccaaagataactcgttctat
tcatcgagtgactcggaggacgaggatgaacccaggaagttccgcgtggagatcaagccg
gtggcgcccaacaacgggacgcaccagagccgagcctccatcgacgaactcaaggcttcc
atcgggaacatcagcctgtcgccaccaaacgcgggtcagatgcgaaggaatcaatccagc
gatgagttgggaaagaccaggattccagcgtccttcaacgacagtaggcctgctttcaat
aatgaccttctctctctggatcctttcggcccgaccctgggaggctcctcctcatctaca
gctgaagtgatattacagcgggagctctcctctcccccactggcaggcagcctgcagacc
aaaggagaggtcaccccttccctcgcctccaccaccactaataccttctctccatgggag
gcctcaccggacgaccccttcctggctctgaagcccatcccagcacgggcccagagtgcc
cccatcacccggcaggctgagcccccagacccccaggatccaaccccaacccctgcagcc
ccagccaggctccctcggggagaggaccagtcagcattctcctggtcccagagccagtgg
atagccttcaatgatgactttgtgccattccgacgccaacagagttgcggtcctggtacg
ggtacaggcccggtcagccatgaccggacccagtcaaacccccctaccagcaggacccag
tctaaccctcctattgacagggtccagtctggccggtccatccgtttcttctctgaggac
cccgctgacccctataacaagatgccgctgagcagtggggttgtggaggacagcgcctcc
tgtgtctcggaggtgttatcagcactgacagaggggatggtagcctcagcagctagccaa
acaaacaacgtgcctgccctggccagacccactactcctctagctggggccctggtgcct
cctccacgaccctcctccagacccaaactacccacaggaaaactcacaggaatcactgaa
attgtgcggccgttcagcccgccgaagacgttgtccaacgccagtcttcctctggcagct
cctctcgcccgggcagagagctcctcctccctgtcctccaccgcctccctcagtgcctcc
aacacacccaccgtggggcctgagcgtacctttcgtctctcccgctcctctccggaacca
gagttcctcctttctccctctcctctgtttctcctcagccaaaaggatgatggtttcatt
gggaagctgcccacctttgagaagcgctgtgaaacgcctgcagggacgtctcgcggtccc
agcccggtgaccctggcatcccaggatgccttgcccatcgctgtggccttcacagagtct
gttaatgcctactttaaaggagctgatcccactaagtgcatagtaaagatcactggtgac
atgaccctgtccttccccatgggtatcatcaaggtgttcaccagtaacccctcccctgcc
gtgctcaccttcaaactgaagagcacgtccaaactggagcagatcctccccaaccagaca
ctactgttcagtgatccctcgcaaagtgacactaataccaaggacttttggttcaacatg
caagctctcacatcctacctcaggaaagcatcagagcagaaccctgctgcatcctactac
aatgtggacatcctcaaataccaggtgtcctctaatgggatccagtccacccctctgaac
ctggcagtgtactggaagtgtacccccaccaccactgacctgaggctggactaccgttac
aacccagagtccatgctctgccccggccctctttccaacgtacaggtcctagtgcccgta
gacggggaggtcatcaacatgcagtccctgcccaatgctgtctggaactcagagctgaat
aagtctctatggaagctgagtgatatctcagagaagtctgacaatgaaggctcggggtct
ctgagggctaagtttgagctgtcggatggcccgtccaccccaaccaccctggctgtgcag
tttatgagcgaggggagcacactgtcaggggtggacatggagctgttgggagccgggtac
agactgtccctcaacaagaagaggtttgccacaggtcgttacatggcagactgttga
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