Salvelinus namaycush (lake trout): 120020941
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Entry
120020941 CDS
T07522
Name
(RefSeq) tubulin alpha chain, testis-specific-like
KO
K07374
tubulin alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04210
Apoptosis
snh04517
IgSF CAM signaling
snh04530
Tight junction
snh04540
Gap junction
snh04814
Motor proteins
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120020941
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120020941
09143 Cell growth and death
04210 Apoptosis
120020941
09144 Cellular community - eukaryotes
04530 Tight junction
120020941
04540 Gap junction
120020941
09142 Cell motility
04814 Motor proteins
120020941
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120020941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120020941
03036 Chromosome and associated proteins [BR:
snh03036
]
120020941
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120020941
04147 Exosome [BR:
snh04147
]
120020941
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120020941
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120020941
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120020941
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120020941
Exosomal proteins of other body fluids (saliva and urine)
120020941
Exosomal proteins of colorectal cancer cells
120020941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
120020941
NCBI-ProteinID:
XP_038820516
UniProt:
A0A8U0TM10
LinkDB
All DBs
Position
Sna26:complement(9735521..9738790)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSNKAVGGGDDSCNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNFARGHYTIGKEIVDLVLD
RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPSPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICSRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEMLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgttggtcaggccggtgtgcagatcgggaatgcctgc
tgggaactatactgcttggaacatgggatccagcccgatgggcagatgcccagtaacaaa
gccgtcggcggaggggatgactcatgcaacaccttcttcagcgagaccggagcgggaaaa
catgtcccccgtgcagtgtttgtggacctcgaaccaactgtcgttgatgaggttcgcacc
ggaacataccgtcagttgtttcatccggagcagctcatcaccggtaaagaggatgccgcc
aacaacttcgcccgaggccactacaccattggcaaggagatcgtcgacctggtgctggac
cgagttcgcaagctgtcggaccagtgcactgggcttcagggcttcctgatcttccacagc
tttggtggtggaaccggctccggctttgcttctctgctcatggagagactgtcagtggac
tacggcaaaaagtccaaactggagtttgctatttacccttcacctcaggtgtccacagca
gtggtggagccctacaattctatcctgaccacccacaccaccctggaacactcagactgt
gctttcatggtcgacaacgaggccatctacgacatttgcagtcgtaacctggacattgag
cgccccacttatactaacctcaacaggctcattggccagatcgtctcctccatcacagct
tcgctgcgtttcgatggagccctcaacgtggacctgactgagttccagaccaacctggtg
ccatacccccgtatccacttccccctggtcacctacgcacccatcatctctgctgagaag
gcctaccacgagatgctttctgtggcagagatcaccaacgcttgcttcgagccagccaac
cagatggtgaagtgtgatcctcgccatggcaagtacatggcctgctgcatgctgtatcgg
ggggatgtggtgcccaaggatgtcaatgctgccatcgccaccatcaagaccaaacgcact
atccagtttgtcgactggtgccccaccggcttcaaggtaggtatcaactaccagccaccc
acagtggtgccaggtggagatcttgccaaggtccagagagccgtttgcatgttgagcaac
accacagccatcgctgaggcctgggctcggctcgaccacaagtttgatctgatgtacgcc
aagcgtgcctttgtgcactggtatgtgggagagggtatggaggagggggagttctctgag
gccagagaagatctggctgccctggagaaggactacgaggaagtgggagtggattcagtg
gagggagaggctgaggaaggagaggagtactaa
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