Salvelinus namaycush (lake trout): 120020959
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Entry
120020959 CDS
T07522
Name
(RefSeq) AP-3 complex subunit beta-1-like
KO
K12397
AP-3 complex subunit beta
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120020959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120020959
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Others
AP-3 complex
120020959
Endosome - Golgi transport
120020959
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
HEAT_GCN1
MOR2-PAG1_C
TPR_CAND1
Motif
Other DBs
NCBI-GeneID:
120020959
NCBI-ProteinID:
XP_038820553
UniProt:
A0A8U0P9T9
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Position
Sna26:11864926..11921524
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AA seq
1112 aa
AA seq
DB search
MLSMSTNNLSYNDQGGSDSAVEVGQETTPTSSNAGFGLFSTNFKKNDDLKEMLESNKDSL
KLDAMKRIIALIAKGKNASELFPAVVKNVASKNIELKKLVYVYLVRYAEEQQDLALLSIS
TFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTSAHAIQKLY
SLDPDQKEHLIEVIDKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEE
WGQVVIITMLTRYARTQFTSPWKEDGQFDENSETAFYESDEKKTKNGDEKKSYMMDPDHR
LLLRNTKPLLQSRNTAVVVSVAQLYWHLAPKHEVGVITKSLVRLLRSHREVQYIVLQNIA
TMSIQRKGMFEPYMKSFYVRSTDATHIKSLKLEILTSLANEANISTILREFQTYVKSQDK
QFAAGTIQAIGRCATNISEVTDTCLQGLVLLLSNRDETVVAESVVVIKKLLQTQPTQHSD
IIKHMAKLFDNIAVPMARASILWLMGEYCERVPQIAPDVLRKMAKSFTSEEDIVKLQTVN
LAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNEKSGALGKYARRIL
LAPKPAPVLESTYKDRDRYQLGTLSHTINTKASGYLELSDWPAVAPDQSVRNVEVIEPVK
EWAPSLGKTGKSKLSKSSDDKFYSDSGEEEEEKDKGSGSSSSDDSSSSSSSEESSSEAES
DEEKSSSPSSEESDKSSSQSEKSSSESDSEQKKKTTKKPPQKKTVKPTAKDSDSDENGNV
AKEASSSSAEETSSGSDSGSDADSHSGTERKKKTKSKAKPKVEVKSTKVVSLLKEVSLLD
LDDFNPTPVTRPKMSVLSPSLLGDLEGLSLSNISSTIQVSGPAFVPEKRHDLLHRMAGKG
LSAHYQFPRQPCLYQPTMVSVQISLTNTSDHPLEQIHIGDRSPTGLHMHCFNTIECLLPD
ASVTVSLGVDFNDSTQAANFQLCTKEDQFSVSIQPAVGELFLPVTMTEQDFRKEQGKLLG
MNESSATITMAAENTTSQPISRQVATVANLGVVPSGQDNIHRFAGKTASSGAVVLVTVEL
RGESTALITINTEKSVMGPMLLRDLKWALAQA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcatgtcgaccaacaacttgtcgtataacgaccaaggaggatcggattcagcg
gtggaggttggacaggagactaccccgacctcctccaatgctggatttggcctgttcagc
accaactttaaaaagaatgatgaccttaaagagatgctggagagcaataaggactcactc
aaactggacgccatgaagaggatcattgcgctgatcgccaaggggaagaatgcctccgag
ctgttcccagctgtggtgaagaatgtggccagtaagaatatagagctgaagaagttggtg
tatgtgtacctggtgaggtatgcagaggagcagcaggacctggccctactgtccatcagc
acctttcagagggccctcaaggaccctaaccagctgatcagagccagtgctctgagggtt
ctgtccagtatcagagtccccatcatcgttcccatcatgatgctggccatcaaggaggct
gcctccgacatgtccccttacgtcaggaaaacatccgcccacgccatccagaaactctac
agcctggatccggatcagaaggagcacctgatagaagtcattgataaattgctgaaggac
aaaagcactctggtagcgggcagcgtggtgatggcctttgaggaagtgtgtccggaccgt
attgacctgatccataagaactaccgtaaactctgcaatctgctggtggacgtggaggag
tggggtcaggtggtcatcatcaccatgttgacccgctacgccaggacgcagttcaccagc
ccctggaaagaggatggtcagtttgatgagaacagtgagacggcgttctatgagtctgat
gagaagaagacgaaaaatggggacgaaaagaagtcctacatgatggaccccgaccaccga
ttgcttctcaggaacaccaagcctctactgcagagtagaaacactgctgtggtggtgtca
gtagctcagctgtactggcacctggctcctaaacacgaggtcggcgtcatcaccaagtca
ctggttagactgctccgaagccacagggaggtgcagtacattgtgttacagaacatagcc
accatgtctatccagaggaagggcatgtttgaaccttacatgaagagtttctatgtgaga
tccacagatgccactcacatcaaatcactcaagctggagatcttgaccagcctggccaac
gaagccaacatctcaaccatccttagagagttccagacttatgtgaagagccaggacaag
cagtttgcagctggtaccatccaggccatcggcaggtgtgccaccaacatctctgaggtg
acagacacctgcctccaaggactggtgctgctactctccaaccgagacgagacggtggtg
gctgagagcgtggtggtcatcaagaagcttctccagacccagcccacccagcacagtgac
atcatcaaacacatggccaagctcttcgacaacatcgctgtgccgatggcgcgggccagc
atcctgtggctgatgggagagtactgtgagagggtccctcagatcgcccccgacgtcctc
cgcaagatggccaagagcttcacctccgaggaggacatcgtcaagctgcagactgtcaac
ctggctgccaaactctacctcaccaactccaaacagaccaagttgttgacccagtacatt
ctgaacctggggaagtatgaccagaactatgacatcagagaccgcactcgcttcatccgc
cagctcatcgtgcccaatgagaagagcggagcactcggcaagtacgcccgccgcatcctg
ctggcgcccaaaccagcgcccgtcctcgagtccacgtacaaagaccgtgatcgttaccag
ctgggaaccctgtcccacaccatcaacaccaaagccagcggctacctggagctctctgat
tggcctgccgtggctcctgaccaatcagtgaggaacgtggaggtgattgagccggtgaag
gagtgggctccatcgctagggaagactggaaagtccaagctgtccaagtcatcagatgat
aagttctactctgactctggagaggaggaggaggagaaggataagggctcagggagcagt
agcagtgatgacagcagcagcagcagcagtagtgaagagtcaagcagtgaggcagagagc
gatgaggaaaagagcagtagtccgagcagtgaagagtccgacaagtcctccagccaatcg
gagaagagttccagtgagtccgactctgaacagaagaagaaaacaactaagaaaccacca
cagaagaagacagtcaaaccaacggccaaagacagtgattcggatgagaatgggaacgtt
gctaaagaagccagcagttcgtctgcagaagagacttcgtctggttccgattctgggtcc
gacgcagactcccactcaggcaccgaacgcaagaagaaaaccaagtctaaagccaaaccc
aaggtggaggtgaagtcaacgaaggtggtgtccctgttgaaggaggtgtccctgttggat
ttggatgacttcaatcctacaccagtgacccggcccaagatgtctgtcctctcccccagc
ctgcttggagacctggaaggcctgtctctctccaacatctcatcaaccatacaggtgagc
ggcccggcgtttgtcccagagaagaggcatgacctgctgcaccgtatggcaggtaaaggt
ctgtcagcccactaccagttccccagacagccctgtctctaccagcccaccatggtctca
gtccagatcagcctgaccaacacctcagaccaccctctggaacagatccacatcggagac
aggagccccacaggactccacatgcactgcttcaatactatagagtgtctgctgccagat
gcctcggtgactgtgtctttgggcgtcgacttcaacgactcaacacaagcagccaacttc
caactgtgtacgaaggaggaccagttcagtgtgtccatccagcctgccgtaggagaactc
ttcctacccgtcaccatgaccgaacaggacttccgcaaggagcaagggaaactgctgggc
atgaacgagagctcggcaaccatcaccatggcagcagagaacacgaccagccaaccaatc
agcagacaggtggcaaccgtggccaacctgggagtggttccatccggtcaagacaacatc
cacaggtttgctggtaagacggccagtagtggagctgtggtgctggtgacggtagagctg
aggggggagtctacagccctgatcaccatcaacacagagaagagtgtcatgggtcccatg
ctgctccgagacctgaaatgggccctggcccaggcctag
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