Salvelinus namaycush (lake trout): 120020990
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Entry
120020990 CDS
T07522
Symbol
tmc2a
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120020990 (tmc2a)
03037 Cilium and associated proteins [BR:
snh03037
]
120020990 (tmc2a)
Transporters [BR:
snh02000
]
Other transporters
Pores ion channels [TC:
1
]
120020990 (tmc2a)
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120020990 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Strabismus
Motif
Other DBs
NCBI-GeneID:
120020990
NCBI-ProteinID:
XP_038820585
UniProt:
A0A8U0P9C2
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Position
Sna26:19784438..19792203
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AA seq
958 aa
AA seq
DB search
MPRKSDVAAKIEDVGIEIDGDVSDSEDDTSRRRGNRRPAAGRGGARGRGKKPADEDDEDE
EEEEAPRNRRGANKKKGAKSRDTDDESEDDTPKRRQGRAANKGAANKKKGGKAQDSDEDS
EEEKGNKRNKKGATGKKGKEEETKDKKGDAKGKGKGKEKEDEKDKKKKKKKESSSDTDSN
TDSEEESMSEGEMERLKEEVEEKKKVIAIMRNKPWRMKRRLVHLKECQEFVDKFEGALGK
GKGRKFYAYKVMMTKKWIKFQRDFENFKTTCIPWERKIKEVESHFGSSVASYFIFLRWMY
GMNMVLFGLTFGLVVIPEVLMGLPYGSIPRKTVPRAEQPTAQDYSVLMDFNGYCKYSVLF
YGYYNNQRTIGLLKFRLPLSYLMVGVGTFGYSLMVVIRTMAKNADVGGGDGDDGEFTFAW
KMFTSWDYLIGNAETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANFMIICC
LGGSGYLIFFVVKRSQEFANRDDLSWYEKNELELIMSLLGLVCPPLFETIAELEEYHPRI
ALKWQLGRIFALFLGNLYTFLFALFDEVNNKLEEEVSIRNASIWAQKEYYANFTLYNNDT
DTTPPPMDPSDVIRGPCWETAVGIEFVKLTVSDIQVTYLTILIGDFARAVIVRFLNYCWC
WDLEATYPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQCWAVMA
TNVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGKAKMFDVIM
ETIDLDLPAFLGTLMGYAANPGLIIPAVLLMVLAIYYLNSVSEAYQHANAELKKKMQMAR
DEEKNRRNNTESTDQVMKDLEDLLPNRSLLPPAPPPETGADNKADQGGKSTKVRPGTAGK
DVNLQKDVSLSSPNPNARGAVTRPPGPRGPGPLPGNGQQGPGGGPGRGRGRGQPPPRR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagagtgatgtggcggcgaagattgaggatgttggaatcgagatcgatggg
gacgtgagtgacagtgaggatgacaccagtcgaaggagagggaacagaagaccggcagct
ggcagaggaggagcccgcggcaggggcaaaaagccagctgatgaggatgatgaggacgag
gaggaagaggaggcccccagaaaccgcagaggagccaataagaagaaaggtgctaagtca
cgtgacaccgacgatgaaagtgaggatgacacccccaagagaagacaaggaagagcagca
aataaaggagcagcaaacaaaaagaaaggaggaaaggcccaggacagtgacgaggacagc
gaggaggagaaggggaacaagagaaacaagaagggagccacgggaaagaaggggaaagaa
gaggagaccaaagataagaaaggagatgccaaagggaagggcaaaggaaaggagaaggaa
gacgagaaggacaagaagaagaagaagaagaaagagagcagctcagacacagactctaac
acagactcagaggaagagtccatgtcagagggagagatggaacgactgaaggaggaggtg
gaggagaagaagaaggtcatagctattatgaggaacaagccctggcgaatgaagaggagg
ctggtacatctgaaagaatgtcaagaatttgtggataaatttgaaggggctttgggaaaa
ggaaaaggcaggaagttttatgcctataaagtcatgatgacgaagaaatggatcaaattc
caaagagattttgaaaatttcaaaacgacttgcataccatgggaacgaaagattaaagag
gttgaaagtcactttgggtcctcagttgcttcctacttcatcttcctgcgctggatgtat
ggcatgaacatggtcctctttggcttaaccttcggactggttgtgatcccagaggttctg
atgggacttccgtatggatccattcccagaaagacagtgcccagagctgagcagcccact
gctcaagactactctgtcctcatggacttcaacggatattgcaaatactcagtcctcttc
tatggttactacaacaaccagaggaccattgggctgctgaagttccgcctcccgctgtct
tacctcatggtaggagtggggacttttggctacagcctgatggtggtgatacgaacaatg
gctaagaatgctgacgtggggggaggggacggagatgacggggagttcacctttgcctgg
aagatgttcaccagctgggattacctcatcggcaacgccgagacggctgacaacaagtac
gcctccatcaccactagcttcaaggagtccatcgtggatgagcaggagaaccaaaaggat
gagaacatccacctgaggaggttcctgcgtgtgctggccaacttcatgatcatctgctgc
ctgggaggaagtggctacctcatcttctttgtggtgaaaaggtcccaggaatttgccaac
agggacgacctgagctggtacgagaaaaacgagttggagctcatcatgtccctgttgggc
ctggtgtgtcctcccctgtttgagaccattgctgagctggaggagtaccacccccggatc
gccctcaaatggcagttggggcgcatctttgccctctttttgggaaacctctacactttc
ctgtttgccctgtttgatgaggtcaacaacaagcttgaggaggaggtgtccattaggaat
gcgtccatctgggcccagaaggaatactacgctaacttcaccctctacaacaatgacacg
gacaccaccccaccccccatggacccctctgatgtcatcagggggccatgctgggagacc
gccgtcggcatagagtttgtgaagctgaccgtttcagacatccaggtgacctacctgacc
atcctgattggtgactttgcgcgggctgtcattgtcaggttcctcaactactgctggtgc
tgggaccttgaagccacatatccatcgtatggagagtttgacatcagtggcaacgttctt
ggtctggtcttcaaccaaggaatgatctggatgggtgcattctatgctccagggctggta
gggataaacgtcctgcgtctcctctcctccatgtactaccagtgctgggccgtaatggcc
actaacgtgccccatgagagggtcttcaaagcctccaaatccaacaacttctacatgggc
ctcctccttctcatcctctttctcagtctactgcctgtggtctacaccatcatgactttg
ccaccctcctttgactgtgggccattcagtgggaaggccaagatgtttgatgtcatcatg
gagacgatagacctggacctgcctgcctttctgggaacactgatgggctatgcagccaac
cctggcctcattataccagctgtgctactgatggtactggctatctactatttgaactcg
gtatctgaggcgtaccaacatgccaacgcggagctgaagaagaagatgcagatggcaaga
gatgaggagaagaacaggaggaacaacactgaaagcacagaccaggtcatgaaggacctg
gaggacctgctccccaaccgctctctcttgcccccagctcccccaccagagacaggtgca
gacaataaagcagaccaaggtggaaagtctacaaaggtgaggccaggaactgcaggcaag
gatgtgaacctgcagaaagacgtgtccctgtcatcaccaaatcccaacgctcgaggcgca
gtgacccgcccaccgggtccccgggggcctggacctctgcctggaaatggtcagcaggga
ccaggagggggaccagggcgaggacgggggagaggacagccacctccaagacgctag
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