Salvelinus namaycush (lake trout): 120021034
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Entry
120021034 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120021034
04082 Neuroactive ligand signaling
120021034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120021034
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120021034
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120021034
NCBI-ProteinID:
XP_038820616
UniProt:
A0A8U0P7L8
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Position
Sna26:28040724..28192022
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AA seq
511 aa
AA seq
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MGERWPSHTSISHTPTSTTSLSFIAWAQWDSTRIPEGVRWDGGRVPGVLTPDGPIPGDRS
SGSFGRAVVGHREPMPDDSRDNITIFTRILDRLLDGYDNRLRPGLGESVTEVRTNIYVTS
FGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPLNNLLASKIWTPDTFFHNGKKSVA
HNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDTHACPLKFGSYAYTNNEVVY
LWTKGDEDSVVVADDGSRLNQYDLLGHVIGKESMISSTGEYVVMTTYFHLKRKIGYFVIQ
TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWF
MAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEAQEMRRRESASLSKKANNTFNIVGTTY
TINEAKDPGLITVSRSATTATHHQHHHHHHHSHKVPKMDDNYVEAIKSYNRVSRVDKISR
IIFPVLFFIFNLVYWATYINSKPPPKSTTHN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggagagaggtggccttcccacacctccatcagccacaccccaaccagtaccacttcc
ctctccttcattgcctgggcacagtgggattcgactcgcattcccgagggagtacgatgg
gacggcggccgggtgccaggtgttcttactccagatggacctatacctggcgaccgttcg
tccggctccttcgggagggcagtggttgggcacagagagccgatgcctgacgacagtaga
gacaacatcactattttcacccggatcctggacagactgctggatggctacgacaaccgg
cttcgccccggactaggagagagtgtgacggaggtgaggactaatatctacgtgaccagc
tttggaccggtgtcagacacagacatggagtacaccatcgatgtgttcttccgtcagagc
tggagggatgagaggctgaagttcgacgggcccatgcaggtcctgcctcttaacaacctc
ctggccagtaagatctggactccagacaccttcttccacaacgggaagaaatctgtggcc
cacaacatgaccacgcccaacaaactgctacgactggtggacaacggtaccctgctttac
actatgaggctaaccatccacgctgagtgtcccatgcacttggaggatttccccatggat
acacatgcctgccctctgaagtttgggagctatgcgtatacaaacaatgaggttgtctat
ctctggaccaaaggagatgaggactctgtagtcgtagcagatgatgggtcaaggctaaac
cagtatgacctactgggccacgttattgggaaagaatctatgatttccagcacaggagaa
tatgtagtgatgacaacgtatttccatttgaaaaggaaaattggctattttgtgattcaa
acctaccttccgtgcatcatgactgtcatcctgtctcaggtctccttctggctaaacaga
gagtcggttcccgcccgcactgtattcggggtcaccacagttctaaccatgacaaccctg
agtatcagtgccaggaactccctgcctaaggtggcctatgccacagctatggactggttc
atggcggtatgctatgcctttgtcttctctgccctgatagagtttgccacagtcaactac
tttaccaagcgcagttgggcgtgggatggcaagaaagaggcccaggagatgaggagaaga
gaatcggcctctctttccaaaaaggccaataacacattcaacattgttggaactacatac
accatcaacgaggcaaaggacccaggtttaatcaccgtctccaggagtgccactacagct
acacaccaccaacaccaccaccaccaccaccacagccacaaggttcctaaaatggacgac
aattacgtggaagccataaagtcctacaaccgtgtcagcagagtggacaagatctcacgc
atcatcttccctgtgctgttcttcatcttcaacctggtctattgggcgacgtacatcaac
agcaagccgcctcccaagtccaccacccacaattaa
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