Salvelinus namaycush (lake trout): 120021103
Help
Entry
120021103 CDS
T07522
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120021103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120021103
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120021103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
120021103
NCBI-ProteinID:
XP_038820671
UniProt:
A0A8U0PA30
LinkDB
All DBs
Position
26:complement(33903515..33914869)
Genome browser
AA seq
466 aa
AA seq
DB search
MVQEAKGTEGEEEEDSDSDDDDDVKVTIGNIKTGAPSYMGTGMNLSLKPARGYASAAAIK
LQPKGIDIETLGAFNGAPVVEVEMDIFEDKPWRKPGADLSDYFNYSFNEETWKGYCERQR
RLQLGLEPSAPLSFENKITVQQGRATTLEKDTELPSIKPDYKPDFPPASVLALAANRLKA
GPPPNRKLGGTIDVIGGQTGAIRRVEGRRREMQEQNPIQVLGDHGNKVQPLVPPAGPPPP
LPMGMPPPHFLHPPPPVSGMPPPLHPPGIPPPSITGLFLPPLAPPPTLMMPPVDSSRAPL
PFGYNSGESSFISYPPVSSSHMPWGSVLEKGGEDRGRGHWEYQGSHRERERERDQERDHT
PTTSEYNEDDRYHYYSHDRESEREFEHSYLHVHDSSGRRSREREEHQRDRRHRDKEESGK
HKSSKRKQHDDEGEGHRRHKHKKSKRSKEDKDVPEDMLGCGEEHKD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggaagccaaaggtactgaaggtgaagaggaggaggacagtgacagtgatgac
gatgatgacgtcaaggtcaccattggtaacatcaaaactggtgcaccttcctacatggga
acgggcatgaacctgagcttgaaaccagctcgtggctatgcctcagcagcagccattaag
ctgcagcccaaagggatagatatagagacactaggggccttcaatggtgcaccagttgtg
gaggtggaaatggacatctttgaggacaaaccatggagaaagccaggtgccgacctctca
gactacttcaactatagttttaatgaggaaacgtggaagggatactgtgagagacagcgc
agactacagcttggcctggagcccagtgctcctctcagttttgaaaacaagataacagtt
cagcagggaagggcaaccactttagaaaaggataccgaactgccttccatcaagcctgat
tacaagccagattttccccctgcttcagtcctggccctcgccgccaacagactgaaggca
ggacccccacctaacaggaaattgggtggaactattgatgtgattggtggacagacagga
gccattcgccgggttgaaggccgaaggagggaaatgcaggaacagaatcctatccaggtg
ctcggagaccatggtaacaaggtacaacccttggttccaccagcaggacctccccctcct
cttccaatgggtatgcccccaccacacttcctgcatcctcctccaccagtatctggtatg
cccccacctcttcaccccccaggtatacccccaccttccattacaggcctgttcctacct
ccccttgctcctccccctaccttgatgatgccacctgtggatagcagtagagcccctctt
ccttttggatacaacagtggagagtcaagcttcattagctaccctccagtctcatcatca
cacatgccttggggctctgtgctggagaaggggggggaagacagaggacgagggcattgg
gagtaccaaggaagtcatagagaaagagagagagaaagggatcaagagagagatcatact
ccaaccaccagcgaatataatgaggatgaccgttaccactactacagccatgatcgagag
agtgagcgagaatttgagcacagttaccttcatgttcatgacagcagcggtaggcgtagc
agggagagggaggagcatcagcgagacagacgccatcgtgacaaggaggagagtggtaaa
cacaagtcttccaaacgcaagcagcatgatgatgagggggaggggcatcgcagacacaag
cacaagaaaagcaaacgcagcaaagaagacaaggatgtcccagaggatatgttggggtgt
ggggaagagcacaaggactga
DBGET
integrated database retrieval system
