Salvelinus namaycush (lake trout): 120021127
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Entry
120021127 CDS
T07522
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120021127 (supt6h)
03036 Chromosome and associated proteins [BR:
snh03036
]
120021127 (supt6h)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120021127 (supt6h)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120021127 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
SPT6_acidic
Tex_central_region
S1
S1_RRP5
SH2
Spt6_S1
Tex_N
Motif
Other DBs
NCBI-GeneID:
120021127
NCBI-ProteinID:
XP_038820694
UniProt:
A0A8U0TMD1
LinkDB
All DBs
Position
26:36580359..36609309
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AA seq
1338 aa
AA seq
DB search
MSDFIDSEAEESEEEFEEKDLKPKKTQAFMDDEEEEEELNTEDQDEHGNLMGLIDDDVDE
DEEEKKSGGAGSGSDSEDEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDRVK
TMDDDEDDEKDQIADEIFHRGDDEDGEGELEEGETVDPPLRRHGERLDEEEEEEGEEESD
IDDFIVDDDGQPITKRRSKKFSGYTDAALQEAQEIFGGDFDFAEFDADGAYEQGEEEEED
QDEEGWDRPKKPTKRRVGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVK
PAEDDELEEEAEWIYRNAFSTPTISMQESTDYLDRGATTNFSRKGPSTIAKIKEALNFMR
NQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWCQLKSRKQNLTRLFRRMQGYQYEQ
ISADPDKPLADGIRPLDTADMERLKDVQSIDELSDVYSHFLLYYGRDIPKMQNAAKAASK
KKKKKKKKIEVNEEGEEEEVEEEVEEEEEEKGPDLKLASRRDMYSICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFNSPEAVLEGTRYMVAMQIAREP
LVRHVLRQTFQERAKINIKPTKKGKKDMDEAHFGYSFKYLKNKPVKELNGEQFLKMCQAE
EEGLLTIDICIDLLGVKGVAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLTQF
LYPQMAKELKNKLIAEAKENIIKHKHTFTFYIGKLITSVVTGIAHRRPQGESYDQAIRND
ATGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRARMDNGVQGFIPTKFLSDKVVK
HPEERVKVGMTVHCRIMKIDIEKFNVDLTCRTSDLMDKNNEWKLPKDSYYDFDTETEDTK
TEEERKKKQQRTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTW
KVADGIYQHVDVREEGKENAFSLGHTLWINTEEFEDLDEITARYIQPMAAFARDLLGHKY
FQDCNGGDRKKMEELLIRSKKEKPTFIPYFVSACKDLPGKFILGYQPRGKPRVEYVTISP
DGFRYRSQMFPTVNGLFRWFKDHFQEPVPGITPSSSSRTRTPASVNATPANINIADLTRA
VSALPRNMTSQMFSAIAAVTGQGQGQNANTTPAQWNSSQYGYTGGSSGGGGGSSSAYHVF
ATPQQPMTTPMMTPSYSYTTPSQQTMGTPQYPSSTPQSSHGHTQSSHQGHSSHQGHSSHQ
GPSSSSRGRTPQQQPKSSDSTAVDWGKVAEQWLQEKEAERKKQKTPRMTPRPSPSPMIQS
TPMSIAGDATPLLDEMDR
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgatagcgaggctgaggagtcggaggaggagtttgaagagaaagac
ctgaagcctaaaaagacccaggcgtttatggatgatgaggaagaggaggaagagttaaac
acagaggaccaggatgagcacgggaacctgatggggctcatcgacgatgatgtggatgaa
gatgaggaagagaagaaaagcggaggagcgggcagcggcagcgactcagaggatgaagtc
agacacagacgcaagaaacgcaactatgacgactacctggatgatgatgatctggacctt
attgaggagaacttgggagtcaaagtcaagaggaggaagaagaagtatgaccgtgtgaag
actatggatgatgatgaagatgacgagaaggaccagatcgcagacgagatcttccacaga
ggagatgacgaggacggagagggggagctggaggagggagagacagtcgacccgccccta
cgtcgccatggtgaacgcctcgatgaggaggaggaagaggagggagaggaggagtcggat
attgatgactttatcgtggacgacgatggccaacctatcaccaagaggagaagcaagaag
ttctcaggatacacggacgcagccctccaggaagctcaggagatcttcggcggcgacttt
gactttgcggagttcgacgccgacggtgcttatgaacagggtgaggaagaggaggaggac
caggatgaagagggctgggaccggcccaagaagccaacgaagaggagagtggggaggaag
agcatcttcgagctctacgagcccagcgagctggagagtagtcacatgactgaccaggac
aacgagatccgctccacagacatgccagagaggttccagctgcgctccatcccagtgaag
cctgctgaggatgatgagttggaggaagaggcagagtggatctacagaaacgctttctca
acccccaccatctccatgcaggagagtacagattacctggacagaggggccacaactaac
tttagcaggaagggccccagcaccatcgccaagattaaggaggccctcaacttcatgagg
aatcagcattttgaggttccgttcatcgcattctacaggaaggagtacgtggaaccggag
ctcaacatcaacgacctgtggaaggtctggcagtgggacgagaagtggtgccagctgaag
agcaggaagcagaacctgacacgtctgttccggaggatgcaggggtaccagtatgagcag
atctctgccgaccctgacaagcccctggccgacggcatcagacccctggacactgctgat
atggagagactgaaggacgtccagtccatagatgagctgagtgatgtgtatagtcacttc
cttctgtactatggccgagacatccccaagatgcagaacgcagccaaggccgccagcaag
aagaagaagaagaagaagaagaagattgaggtcaacgaggaaggtgaggaggaagaggta
gaggaagaggtggaggaggaggaggaagagaaggggcctgacctgaagctggcatctcgt
agagacatgtacagcatctgtcagagcgccgggctcgatggcctggctaagaagtttggt
ctgactccagagcagtttggagagaatctgagggacagctaccagcgtcacgagacagag
cagttccctgccgagcctgtagagttggctaaagactacgtctgcagccagtttaacagc
cccgaggcggtgttggaggggacccgttatatggttgcgatgcagattgccagggagcct
ctggtcagacacgtcctcagacagacgttccaggagagagccaagatcaacatcaagccc
accaagaagggaaagaaggacatggacgaggcccactttggctactccttcaagtatctg
aagaacaagccggtgaaggagctgaacggagaacagttcttaaagatgtgccaggctgag
gaggagggccttctcaccatagacatctgcatcgaccttctaggggtcaaaggggttgca
ggtgaccagacatactttgatgagatcaagcagttttactacagagatgagttcagtcac
caggtgcaggagtggaacagacagaggaccctggccatcgaacgctccctcacacagttc
ctctaccctcagatggccaaggaactcaagaacaaactcatcgcggaggccaaggaaaac
atcatcaagcacaaacacacctttaccttctatataggtaagctgatcaccagtgttgtg
actggtatagctcaccggcgcccccagggggagagttatgaccaggccatcaggaacgac
gctacagggctgtggcagtgccccttctgtcaacaggacaacttccctgaactcagcgag
gtgtggaaccattttgacagtggttcgtgtcctggccaggctataggtgtgagggctcgg
atggacaacggtgtccagggcttcatccccaccaagttcctcagtgacaaggtggtcaaa
caccctgaggagagggtgaaggtgggtatgacggtacactgtcgcatcatgaagattgac
attgagaagttcaacgtggacctgacgtgtcgtacgtctgacctgatggataagaacaac
gagtggaagctccctaaagacagttactacgactttgacacggagacagaggacaccaag
acagaggaggaacgcaagaagaaacagcagagaaccacctatataaaacgtgtgattgcc
cacccatccttccacaacatcaacttcaagcaggctgagaagatgatggagtccatggac
cagggagatgttgttatcaggccaagcagcaagggagagaaccaccttactgtcacctgg
aaggtagctgacggcatctaccagcacgttgacgtgagagaggagggcaaggagaacgcc
ttcagcctgggacacacactctggatcaacactgaggagtttgaggatcttgatgagatc
acagctcgttatattcagccaatggcagcgttcgctcgtgacctgctgggacacaagtac
ttccaggactgtaacggaggggacaggaagaaaatggaggagttgttgatcaggtctaag
aaggagaagcctacgttcatcccctactttgtctcagcctgtaaagacctgccagggaag
ttcatactgggataccagcctcgtggcaaaccacgtgttgagtatgtgaccatctctcct
gacggcttccggtaccgctcccagatgttccccaccgttaacggactcttccgctggttc
aaagaccacttccaggaaccggtaccaggcatcacccccagcagtagcagtcgaacacgg
acacctgcctctgtcaacgctacaccagctaacatcaacatcgcagacctgacgcgagcg
gtcagcgctctcccacgcaacatgacctctcagatgttcagtgccatcgccgcggtgacg
gggcaggggcagggccagaacgccaacactacgcctgcccagtggaactccagccaatac
ggttacaccgggggcagcagtgggggcgggggaggcagctcctcagcctatcacgtgttt
gcgacgccccaacagccgatgacgacacccatgatgacccccagctactcatacaccacc
cccagccagcagaccatgggtaccccgcagtacccctcctccaccccccagtcctcccac
ggacacacacagagcagccaccagggccacagcagccaccagggccacagcagtcaccag
ggaccctcgtcctcctccagaggacgcactccgcagcagcagcctaagtcaagcgacagc
acggcggtggactggggcaaggtggcagagcagtggctccaggagaaagaggcagagagg
aagaagcagaagacccccaggatgaccccgcgaccttcccccagccccatgatccagagc
acgcctatgtcaatcgctggagacgccacgccccttctggacgagatggaccgatag
DBGET
integrated database retrieval system
