Salvelinus namaycush (lake trout): 120021168
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Entry
120021168 CDS
T07522
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120021168 (trpc4a)
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120021168 (trpc4a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
120021168
NCBI-ProteinID:
XP_038820734
UniProt:
A0A8U0TL55
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Position
Sna26:complement(40719158..40848709)
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AA seq
939 aa
AA seq
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MSQLYYRRTDSSSYRDRIPLRIVRSESELSSLEKAYLGTVEKGDYGSVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
SSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVAVPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYRALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLEEEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWGGKFLTCVFLSLLFPVFSLCYLIAPKSRYGLFIR
QPFIKFICHTASYLTFLFLLLLASQHIVTTEPDRQGPAPTTVEWMILPWVLGFIWTEIKQ
MWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYTRYSGCKPRNQWEMWHPTLVAEAV
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETKASDEKGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTEFVG
ATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPF
NIVPSPKAVWYLVCWTNRHVCKRTHSKPTDTFGTLGTRAAENLRRNRQYQEVLRNLVKRY
VAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMMKTGKPGLGGPGVVVGGGSGGAGV
GGGQSCLAYADRSLKVPTTPTPIGQLKNKKTLFTVTASIIQQGGATASSPRLPDALAFNG
LGLANGLPPLPADGGSSGSSRDKQGQRKDFPRDITDFGLFQKRQRGGAGATGVGNIYSVS
EEMGETGESDGEERKGEAGGEEGKGLDPAASLVDIITCL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctgtactaccggcggacagacagctcctcgtaccgggaccgtatccctctg
cggatcgtccggtctgagtcggagctgtcttccctggagaaggcctatctgggaaccgtg
gagaagggagactacggcagcgtcaaacaggctctggaggaggctgagatctacttcaag
atcaacattaactgtatagacccgttaggccgcacagctctgctgatcgccatagagaat
gagaacctggagatcatagaactactgctgagctttaacgtgtatgtcggtgacgctctg
ctgcacgccatccgcaaagaggtggtgggggccgtggaactgcttctcaaccacaagaaa
tccagcggaggcatgcaggttcctccgatcctattggacaagcagttctctgacttcact
cctgacatcacccccatcattctggcagctcacaccaacaactatgagatcatcaaacta
ctggtgcagaaaggagtggctgttccacaaccacacgaggtgcgttgtaactgtgtggag
tgtgtgtccagctcggatgtggacagccttcgccactcccgatcccgtctcaacatctac
cgagccctgtccagcccttccctcatcgctctctccagtgaagaccctttcctcacagca
ttcagactgagctgggaactacaggagcttagcaaggtggagaatgaatttaagtcggag
tatgaggagttatcccaacagtgtaagcagtttgctaaagaccttctggatcagaccagg
agctccagagagctggagatgatcctgaactacagagatgacattaacctgctggaggag
gagggaaacaacgacctggctagactcaaactggctattaaataccaccagaaagagttt
gtagcacagcccaactgtcagcagctgctggcatctcgctggtacgatgagttcccaggc
tggagacgtcgtcactggggagggaagttcctcacctgtgtcttcctcagcctcctcttc
cctgtcttctccctctgctacctcatagccccgaagagccgctatggacttttcatcagg
caacccttcatcaagtttatctgccacacagcatcctacctcacctttctgttcctgctc
ctgctggcatcacagcatatagtgactacagaaccggacagacaggggccagcacctact
actgtagaatggatgatactgccctgggtactgggttttatctggacagagatcaaacag
atgtgggatggaggattccaggactatatacatgactggtggaacctcatggacttcgta
atgaactctctgtacctggctactatatcactgaagatagtggcctataccaggtacagt
ggctgtaagcccaggaaccagtgggagatgtggcatcccaccctggtagctgaggctgtg
tttgccattgccaacatcttcagttcccttcgtctcatctccctgttcacagccaactcc
cacctgggaccgctacagatctcattgggaaggatgctcctggacatcctcaagttcctc
ttcatctactgtctggtgttgctggcgttcgccaacgggctgaaccagctctacttctac
tacgagacaaaggcctccgacgagaagggcaagtgtaaaggcatccgctgtgtcgagcaa
aacaacgctttctccacgttgtttgagacgctccagtctctgttctggtctatcttcggt
ctgatcagtctgtatgtgactaacgtagatgctgaccatcagtttacagagtttgtaggg
gcaaccatgtttggaacctacaatataatctctctggtggttctactaaacatgctgatc
gccatgatgaacaattcctatcaacacatcgctgaccatgcagacattgagtggaagttt
gcaaggaccaagctgtggatgagttactttgaagaggggggtactctaccttctcccttc
aatatcgtacccagccccaaggcagtgtggtacctggtgtgttggaccaatagacatgtc
tgtaagaggacccactccaaaccaactgataccttcggcactctggggacgagagcagca
gagaacctgaggagaaaccgccagtaccaggaggtgttgaggaacctggtgaagcgatat
gtagcagccatgatcagagacgctaaaacagaggaggggctgactgaagagaactttaag
gagctgaagcaggacatctctagtttccgttacgaggtgatggggatgatgaagacaggt
aaacctggtctgggtggtccgggggttgttgttgggggtggttcgggcggggctggggtt
ggtggagggcagtcctgcctagcctatgccgaccggtcccttaaagtccccaccaccccc
acacccattggccagctgaagaacaagaagacactgttcaccgtaaccgcctccatcatc
cagcagggtggcgccacagcctcctctcctcggctcccagacgcacttgccttcaacggg
ctgggcctggctaacggcctgccccccctgcccgcagatggtggttcctctggaagctcc
agagacaagcagggtcagaggaaagacttccccagggacatcactgattttgggctgttc
cagaaacgccagaggggtggagctggagctactggggttgggaatatatactctgtgtcc
gaggagatgggggagacaggggaatcggatggggaggaacggaagggggaggcagggggt
gaggagggcaagggactggatcctgctgcctccttggtggacatcatcacctgtctttag
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