Salvelinus namaycush (lake trout): 120021177
Help
Entry
120021177 CDS
T07522
Symbol
ccdc174
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120021177 (ccdc174)
03041 Spliceosome [BR:
snh03041
]
120021177 (ccdc174)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120021177 (ccdc174)
Spliceosome [BR:
snh03041
]
Complex C
Other components
EJC/TREX
120021177 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
120021177
NCBI-ProteinID:
XP_038820746
UniProt:
A0A8U0PA73
LinkDB
All DBs
Position
Sna2:30353608..30356428
Genome browser
AA seq
436 aa
AA seq
DB search
MDKKKKQYADTVLYSFFLHLVDLKAELYRKQEQFKHEQLGQDAGTSAKSPKSKKPNVWIK
QNEGVSAPAQKVVEQVAEEENQAKCKLEEKVKLYEQMTKGDFPDEETEGLFLVDFTQKII
DKRENHEPRQGMGGRSWRCMKKDLPGFKKIDLDFQGKGRDLAEKDRLSEDMRGELQRXAW
EREEAMNGPVGRIHYEDIREQQARELGVGYFAFSQDQEQRRKXETLDMLRHQTTDQRSKR
EQLKEKRKALLNAQLAKVRQRKMKTKLDGTQDNQGAGHNHEEDEAHEEAPAVKKLEVEIQ
ERRDTKSGVPHVRDWDRGKVDFLGEWTSRRQDDRESEFTPPSVYFSDDKRQGYGKWAKRE
QDKPKMAFKWSEGQGGGHKEPPQAKPKSSYLPQPQSSTPVPSQPTMLFIDYSSAFNTIVP
SKLITKLRILGLNTSL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaaaagcaatatgcagatactgtactgtactctttttttctgcatctg
gttgatctcaaagctgaactctacaggaaacaagagcaattcaaacatgaacaattgggg
caagatgctgggactagtgccaaatcccccaaaagcaagaaacctaatgtatggatcaaa
cagaatgagggtgtttcagctccggcacagaaagttgtggaacaggtggcagaggaagag
aaccaggcaaaatgcaaactagaggagaaagttaaactgtatgagcagatgaccaaagga
gactttcctgatgaggagacagagggacttttcctggtggatttcacccagaagattatt
gacaagagagagaatcatgaacccaggcaaggaatgggtggacgatcttggagatgcatg
aagaaagacctaccagggttcaagaaaattgacctagactttcagggaaaaggacgtgac
ctggctgagaaggaccgactgtcagaggacatgcgtggagagctgcagaggtaagcctgg
gagagggaggaggccatgaacgggcctgtgggacgaatccactacgaggacatcagggag
caacaggcccgtgagctgggtgtgggctactttgcattttctcaggaccaggagcagcgc
aggaaancagagactctggacatgctcagacaccagacgacagaccagcgcagtaagagg
gagcagttgaaggagaagaggaaggctctgctgaacgctcagttggccaaggtgaggcaa
aggaagatgaagactaagctggacggaacacaggacaaccagggagctggacacaaccac
gaagaggatgaagcccatgaggaggcccctgcagtgaagaagttggaggtagagatccaa
gagaggagagacaccaagtcaggagtaccccacgtcagagattgggacaggggaaaagtg
gactttttgggcgagtggacgagtcggcggcaggatgatagggagtcagagttcactcct
ccctctgtgtacttcagcgacgataagagacagggctatgggaaatgggccaaaagggag
caggacaaacccaaaatggccttcaagtggtcagaggggcagggtggagggcataaggag
ccacctcaggccaagcccaaaagtagttatttaccccagccacagtcaagtacccctgta
ccctctcaacccacaatgctattcattgactacagctcagcgttcaacaccatagtaccc
tcaaaactcatcactaagctaaggatcctgggactaaatacctccctc
DBGET
integrated database retrieval system
