Salvelinus namaycush (lake trout): 120021229
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Entry
120021229 CDS
T07522
Symbol
wdr45
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4
KO
K22991
WD repeat-containing protein 45
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120021229 (wdr45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120021229 (wdr45)
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
Others
120021229 (wdr45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
120021229
NCBI-ProteinID:
XP_038820826
UniProt:
A0A8U0P800
LinkDB
All DBs
Position
Sna26:10592520..10596104
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AA seq
358 aa
AA seq
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MAQPRGVNSLQFNQDQSCFCCAMETGVRIYNVEPLIEKGHLDHEQVGSVAQCSMLHRSNL
LAVVGGGVNPKFSEISVLIWDDAREGRDPKDKLVLEFTFTKPVLAVRMRHDKIIIVLKNR
IYVYSFPDNPVKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLSNTKPGTS
SAPFTINAHQSEIACLALNQPGSVAASASRKGTLIRLFDTTTRDKLVELRRGTDPATLYC
INFSHDSSFLCASSDKGTVHIFALKDTKLNRRSALARVGKVGPVIGQYVDSQWSLASFTV
PAECACICAFGKNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccgagaggagtcaacagcctgcagttcaaccaggaccagagttgtttctgt
tgtgccatggaaaccggtgtcaggatctacaatgtggagcctcttatagagaagggacac
cttgaccatgagcaggtgggtagtgtggcccagtgttcaatgctgcatcgctccaacctg
ctggctgtagtaggaggtggagtcaaccccaagttctctgagatctcagtgttgatctgg
gatgatgctcgggaggggagggaccccaaggacaagctggtgctggagtttacctttacc
aagcctgttctggccgtacgcatgagacacgacaagatcatcattgtgttaaagaacagg
atctatgtctacagtttccctgacaaccctgtgaaactgtttgagtttgacaccagagac
aaccctaaaggactgtgtgacctgtgccccagtctggagaaacagctgctggttttccct
ggacataagtgtggaagtctacagcttgtggacctttccaacaccaagcctggcacatca
tccgccccctttaccatcaacgcccaccagagtgagatcgcctgcctggcgctcaaccag
cctggcagcgtcgcggcctcggcctcccgcaagggcaccctcatcagactttttgatact
accaccagagacaaactagtggagctacgcagaggaacagaccctgctacactctactgc
atcaacttcagtcatgactcttcgttcctgtgtgcctccagtgacaagggcactgttcac
atcttcgctctcaaagatactaaactcaacagacgctcagcattggctcgtgtggggaag
gtgggcccagtgattggtcagtatgtggacagccagtggtcattggccagtttcaccgtt
ccggcagagtgtgcctgtatctgtgcgtttgggaagaacacctctaaaaacgtcaactct
gtcatcgctatctgtgttgacgggacgttccataaatacgtgttcacccctgatggcaac
tgtaaccgagaagcctttgacgtttacctggacatctgtgatgatgacgacttctaa
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