Salvelinus namaycush (lake trout): 120021287
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Entry
120021287 CDS
T07522
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120021287
03041 Spliceosome [BR:
snh03041
]
120021287
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120021287
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120021287
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
120021287
NCBI-ProteinID:
XP_038820905
UniProt:
A0A8U0P9P5
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Position
Sna26:complement(11508166..11523259)
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AA seq
390 aa
AA seq
DB search
MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA
AASLAAMNGRKIMGQEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFEEVVNQSSPSNCTVYCGGVTAGLTEQLMRQTFTPFGQIMEIRVFPDKG
YSFVRFNSHEGAAHAIVSVNGTSIEGHVVKCYWGKETTDMASPMQQVQVPQLTPQQNKIG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWTGVGAVS
NGGVVEPGQGVNGAVLANQSVMGTAGYHTH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaacaacccaagactctgtatgtggggaacctgtcccgggatgtgacc
gaagccctcatcatgcagctgttcggccagatcggaccctgcaagagctgtaaaatgata
gtagatacggcaggtaatgacccctactgctttgtggagttctacgaacacaggcacgct
gccgcgtcgctcgcagccatgaacggtcgtaaaataatgggtcaggaggtcaaagtgaac
tgggccacaacccctagcagccagaagaaagacacaagcaatcacttccacgttttcgtc
ggagacctcagtcctgaaatcaccacggatgacatcagagctgcttttgccccctttggg
aggatatctgatgcccgggtggtgaaagacatggcgactggcaaatctaaaggctatggc
tttgtgtccttcttcaacaaatgggatgcagagaatgccatccaacagatgggaggtcag
tggttgggaggacggcagatcaggaccaactgggccaccaggaagccccctgcgcccaaa
gccacctacgagacgaacacaaagcacctgtcgtttgaggaggtagtgaaccagtccagc
cccagcaactgtaccgtctactgtggaggagtcactgcagggcttacagaacaactgatg
aggcagaccttcaccccctttggtcagatcatggagatcagagttttcccagacaaaggc
tactcgtttgtgaggttcaactcccacgagggagcggcccacgccatagtgtcagtgaac
gggacgtccatagagggtcacgtggtgaagtgttactgggggaaggagaccacagacatg
gccagccccatgcaacaggtacaggtgcctcagctaacaccgcagcagaacaaaattggc
tttgcagcgcagccctacggccagtatgcccagtggtacggtaacgcccagcagattggc
caatacgtgcccaacggatggcaggtgccgacctacggagtctacggacaggcctggaac
cagcagggcttcaatcatttacaggcgggtgcagggtggacgggcgttggagcggtcagt
aatggcggcgtggtggagcctggacagggagtcaacggggcggtactggccaaccagtcc
gtcatgggcaccgctggctaccacacccactga
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