Salvelinus namaycush (lake trout): 120021301
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Entry
120021301 CDS
T07522
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120021301
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120021301
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HHH_3
CUE
T2SSK
Motif
Other DBs
NCBI-GeneID:
120021301
NCBI-ProteinID:
XP_038820928
UniProt:
A0A8U0PAG5
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All DBs
Position
Sna26:complement(26203108..26216574)
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AA seq
945 aa
AA seq
DB search
MNQRRCINHNTDSVNEDLTGQQTHDTVVPETPELKRPPGPGSVRGMESVVLDSDSDEEIS
GSSMMLSGKSLEKEAVTGAVIILSDEEGEEMRTSLQRNGSQLPKNISGSQDPDRKRRLEV
CDSSQQSGASNSSKKPALEEDSVTDDSEDEGPEPSWKSQEDMVRKLQTKFPRLVKEELRE
VLLEHDWHFEDTLEALHMFSEEGGRSSQGDTQASSSASSAPQASAHQAGPAAEPPGCPTS
LPHKSPSGTGEKTISRPTKGTDRRRRVIPEPGTSSEDEASDDFDESAEGVELNSDGSDQE
VGTRSLVKGQILRFFQEASLDELSLISGCSVKKAQRIVELRPFNEWEDLLDALDRGNGLS
TDLVQGCRVVLRERDVVRSLMTKCEKIANKMMQDVTQVVERDKGSQKQPEILNGKYQLKP
YQLIGQNWLTLLHQNNLSGILADEMGLGKTIQAISFLASLYQEGNKGPHLLTVPASTLDN
WVRELNLWCPRLKVLVYYGSVEDRKYLRYDILNRQVDYNIIISTYALTTSNDNDRSLFRK
LKLEYAVFDEGHMLKNMSSLRYRHLMAINAKYRLLLTGTPVQNNLLELMSLLNFIMPDMF
SSSTSQLANMFAMKSSEEQSSFEMERISHAKLIMKPFILRRVKSEVLKQLPAKEEKVEFC
AMSDQQQQLYNALMQKLKGSTNGEKRELTNVMMQLRKMANHPLLHREHYTTTKLAAMSQL
MLKEPTHCEADPALIKEDMEVMTDFELHRLCLQYPSVQDYQLDTDMLLDSGKLSLLTQLL
ASLKTKGDRVVLFSQFTMMLDILEVFLKHLKHHYIRLDGSTPMSDRIVLIDQYNTELDIF
VFLMSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRTVKVIKLISKDSI
EDGMLRIGQKKLKLEQDMTASESQDGDEDSIPEDMASLLKASLGL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaagaagatgtatcaaccataacacagactcagtgaatgaagatctcacgggg
caacaaacacatgatactgttgtcccggagaccccagagctcaaacgtcccccagggccc
ggctcagtgagaggcatggaaagcgtggtactagactctgattcagatgaggagatatca
gggtcttccatgatgttgtcggggaagagtctggaaaaggaagcagttacgggtgctgtt
atcatactgtcagatgaggagggagaggagatgagaacctctctacagagaaatggcagc
cagctccccaaaaacatatcggggagtcaagacccagaccggaagaggagactagaggtt
tgtgacagctcccagcagagtggggcatcaaactccagcaagaaaccagcccttgaggag
gattcagtgacagatgattctgaggatgagggtccagagcccagctggaagagccaggag
gacatggtgaggaaactgcagactaagtttccccgtctggtcaaggaggagcttagagaa
gtgcttctcgagcatgattggcactttgaggacaccctagaagcactgcacatgttttca
gaggagggggggaggtccagtcaaggggatacccaggcatcatcatcagctagttcagcc
ccccaagcctcagcacatcaggcaggcccagcagccgaaccccctggttgtcccacatca
ctacctcacaagtctcccagtgggaccggagagaagaccatcagtaggccgaccaaagga
acagacagaaggaggagggtgattccagagccaggcaccagctctgaagacgaggccagt
gatgactttgatgaatctgctgagggcgtggagctgaactctgatggctcagatcaggag
gttggaacaaggtctcttgtgaagggccagatcctcaggttcttccaggaggcatcgctg
gatgagctgtctctcatctctggctgctctgtgaagaaggcccagaggattgtcgagctg
cgcccatttaacgagtgggaggatctgttggatgctcttgacagagggaacggcctctcc
actgatctggtgcagggctgccgtgtggtcctgagagaacgggacgttgtgcgcagcctc
atgaccaagtgtgagaaaatcgccaacaagatgatgcaggatgtgacccaagtggtggag
agggacaagggctcccagaaacagcctgagatcctcaacgggaaataccagttgaagcct
tatcagctcattggtcaaaattggctgaccctgctccatcagaacaacctgagtggaatc
cttgctgatgagatgggtttggggaagaccatccaggccatctcgttcctggccagcctg
taccaggagggcaataagggcccacatctcctcactgtacctgcctccacactggataat
tgggtgcgggagctgaatctgtggtgtcccaggctcaaagtcctggtgtactatgggtct
gtggaggatcgcaagtaccttcgatatgatattctcaacagacaggtcgactacaacatc
atcatttccacgtacgctctgaccaccagcaacgacaacgaccgcagcctgttccgaaag
ctcaaactggagtacgctgtgttcgatgagggccacatgctgaagaacatgagctcgctg
cgctaccgccacctcatggccatcaacgctaagtaccgtctgctgctgactgggactcca
gtgcagaacaacctcctggagctcatgtccctgctcaacttcatcatgcccgatatgttc
tccagcagcacttcacagctcgccaatatgtttgccatgaaatcatcagaggagcagagc
agctttgagatggagaggatctctcatgccaaactgatcatgaaacccttcatcctcaga
cgtgtcaagagtgaggtgctgaagcagctcccagccaaagaggagaaggtggaattctgt
gccatgagtgaccagcagcagcagctctacaatgccttaatgcagaagctcaagggatcc
accaatggagagaagagagaactgaccaatgtgatgatgcagttgaggaagatggcaaat
catccattgctgcaccgggagcattataccactaccaaactggctgctatgagtcaactc
atgctcaaggagccgacccactgtgaagcagacccagcactgatcaaggaggacatggag
gtcatgacagactttgagctgcatcgactttgtcttcagtacccgtccgtacaagactat
cagctggacacagacatgctcctggactcaggaaaactcagcctgctcacacagcttctg
gcctctctcaaaaccaagggggatagagtggtgctcttcagccagttcaccatgatgctg
gacattctagaggtgttcctgaagcacttgaagcatcactacattcgactggatggatca
acgcccatgtctgacagaatcgtgctgattgaccagtacaacacagagttggacatcttt
gtgttcttgatgtctactaaggctggtggcctgggcatcaacctgacctcagccaatgtg
gtcatcttgcacgacattgactgcaacccctacaacgataagcaggccgaggaccgctgt
caccgtgtcggacagacaaggactgtgaaggtgatcaagctgatcagtaaggactctata
gaggatggcatgctccgcatcggtcagaagaaactcaaactggagcaggatatgactgct
tccgagtcccaggacggagatgaggactcaataccagaagacatggcctcccttctgaag
gcatcactggggctgtga
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