Salvelinus namaycush (lake trout): 120021331
Help
Entry
120021331 CDS
T07522
Name
(RefSeq) myocyte-specific enhancer factor 2C-like isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120021331
04371 Apelin signaling pathway
120021331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120021331
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
120021331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
120021331
NCBI-ProteinID:
XP_038820967
UniProt:
A0A8U0P9V4
LinkDB
All DBs
Position
Sna26:10199223..10226968
Genome browser
AA seq
478 aa
AA seq
DB search
MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGFDSPDIEADDSAGQSPESEDKYRKI
NDDIDLMISRQRLCQALPPSNYDMVGSIQGQNNSGLLYSQPGAGGSLGNHNLLPLLHTQL
GLQRNSMSPGPQHTHRPPSAGNAGGMMVSELSNTVSNTGNGSYSNHPHSPGLLSPGCVSK
GMQAKTPPLMTSMTLSGNRKPDLRTLLPPGNKNNMPSVNQRINHSQSAQSLATPVVSIAT
PTLPGQGMGGYPSALSTSYGTEYSLGDLSSLSGFGGNGSGSLHLGSVTGWQQQQLQNMQH
SALGHMGNLCQNSNLNLQNVHQNLHIKSEPASPPRDRGIGFVSGGMGAVSQGYLTNQGPA
EAGRSPGDSLSSCGSSYDGSDREDHRGNDNFLLRPMSNQEEHHSPSVKRMRLSEGWAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagatccagatagcacggattatggatgaacgcaacagacaggtgacg
ttcaccaagcggaagtttggcctgatgaagaaggcgtacgagctgagcgtgctgtgtgac
tgtgagatcgccctcatcatcttcaacagcaccaacaagctgttccagtacgccagcacc
gacatggacaaggtcctgctcaaatacacagagtacaacgaacctcacgagagcaggacc
aactctgacatcgtggagactctgcgaaagaagggtctaaatggctttgacagtcccgac
atcgaggcagacgactctgctggtcagagccccgaatcagaggacaaataccgcaagatc
aacgacgacatcgacctcatgatcagcagacagagactctgtcaggctctcccaccctct
aactacgacatggttggctccatccagggccaaaataacagcggactactctactctcaa
cctggggcgggcggttccttaggaaaccacaatctgctgcccctcttgcacacacaactt
gggctgcagaggaacagcatgtcgcctggacctcaacacacacaccgaccccccagcgct
ggaaacgcaggagggatgatggtctcagagctgtctaacaccgtctctaacactggtaat
ggtagctatagtaaccaccctcactctccggggctgctgtctccgggatgtgtgtccaaa
ggcatgcaggccaagactccgcccctgatgacctccatgaccctgagtggtaaccgcaag
ccagacctccgcacgctgctgccccctggcaacaaaaacaacatgccctccgtcaaccag
agaataaaccactcccagtctgcccagtctttggctactcctgtggtctccatagcaaca
cctactctgcccgggcagggtatgggagggtacccctctgccctctccacctcctatggc
acagagtactctctgggtgacctgagctctctgtcaggcttcggagggaacggctctgga
tcacttcacctgggatcagtaacaggctggcagcaacaacagctacagaacatgcagcac
tcagcactaggacacatgggaaacctttgtcagaactccaacctcaacctccagaatgtc
catcagaaccttcacatcaagtcagagcccgcctccccgcccagagatcgaggcatcgga
tttgtcagcggagggatgggggccgtgtcccagggctacctaacaaatcagggcccagcc
gaggcagggcggtctcctggcgacagcctatccagctgtgggagctcatacgacggcagc
gaccgcgaggatcaccgcggaaacgacaacttcctgctgcgcccgatgtccaatcaggag
gaacaccacagcccgtccgtcaaacgcatgcgcctatcagaaggctgggctacatga
DBGET
integrated database retrieval system
