KEGG   Salvelinus namaycush (lake trout): 120021338
Entry
120021338         CDS       T07522                                 
Name
(RefSeq) period circadian protein homolog 1-like
  KO
K21944  period circadian protein 1
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:snh03400]
    120021338
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120021338
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 120021338
NCBI-ProteinID: XP_038820977
UniProt: A0A8U0P9Y0
LinkDB
Position
Sna26:complement(27764285..27773334)
AA seq 1481 aa
MSDENAYTTSGNDTSGVGVEENVVGLKVGCQSPESGLSQTGSSGSSNGKRTRSGGKSSPK
SSNSDDTDAHSSGNDSAEREVEGHMGRETSTCSSSHNGKDSAMETTESKSANSHSPSPPN
SSMVYSLLSGSSAQDHPSTSGCSSDQPAWLQTQRELLKALKELKIRMPADHRAKGRSSTL
ASLQYALNCVKQVRANQEYYHQWSVEESHGCSLDLSAFTTEELDNITSEYTLQNTDTFSV
GVSFLSGKLVYISPQASPMLRTKPNRLQGTLFSELLAPQDVSTFYSSTAPCRLPPWASCT
GSMTSPVDCTQEKSMFCRISSGRDSEGEVRYYPFRMTPYQLTLRDSDMSQPQPCCLLIAE
KVHSGYEAPRIPADKRIFNTSHTPGCLFQEVDERAVPLLGYLPQDLVGTPVLMYLHPDDR
PVMVAIHKKILQSAGQPFEHSPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRHKVR
TSPLNEDVFTPSMEVEVRAMSPEIPRLSEQIHRVLVQPVHSGASQGYCSSHGSQSHRPSP
GSSGSSSPSTKGIIQMNIQRPQQMTFQQMCKDVHMVKTNGQQVFIESRNRPPLRKHASAG
DLVMPENLNKDLGPIGALGPTKTLASVQSRKDPSANYSYQQINCLDSIVRYLESCNIPNT
VKRKCGSSSCTTSSTSDDDKQRELSGTAKDLEGSQGKEGSKGGPQMSPLALHGKAESVVS
LTSQCSFSSTIVHVGDKKPPESDIIMMEETPPTTTAPAINNAITTAVTPRPSTFPSPATP
SPAQPERDSRRSAGCSGSLGLTKEVLSAHTLQEEQVFLSRFRDLGQLRMLDPGPPLRGHT
TTHKGVHTSKDYPAGGNGRRRGRGAKRLKHQQEGSQHGGCPKTGSGMNRSSRKEGQGNQG
PMFPMGQPLMMQGPLTSSSSWPTSVASLPPAVSQYPPGVLPFFPLYPNVQQQLLAHTGVN
PNAMQLGYPSPQPGFQYPLHANQIPMPMAPPMMVVLPNYMFPQLNGGVPQLNQLNTAMPQ
YNTAMPHLNPSIPGMAQLNQALPQFNQAIPLPQLNPVLAQFNPAVTQMNGMPLAQHNPSH
VNPALSMIPQHFHNPNPTLPFPNPIPVPGLPCFALPRIDPTFVPRGNSRSSTPQSTCQSP
LEGTNSPLFQSRCSSPLNLLQLEELPGNRQEGMSTGAQQTPPPPGSSSQVGGQGSVNRNS
NMKGDAKEYDNADVDNQDAMSTSSDLLDLLLQEDACSGTGSAASGSGSSGSGSSGSNGCS
TSGSDTRSSNTSKYFGSIDSSENDHKQAAGGAEEAQLMKYVLQDPIWLLMANTDDKVMMT
YQMPTRDRETVLRQDRMVLRAVQKQQPHFTEEQKRELIQVHPWMGTGRLPQAINNPTCTG
CGSPTATSAPRPFDVELQDMDLTGVLQLQEEATAHTETHVTMATDTSISPPQAPQTETKG
GEAERQGEQEGDCKDTRVKELEVTSSSSVTEKGDSVAVNGN
NT seq 4446 nt   +upstreamnt  +downstreamnt
atgagtgatgagaatgcatacaccacttctggaaatgacactagtggagtaggtgtagaa
gaaaatgtggtgggactgaaggtgggctgccagtcccctgagtctggactaagtcagact
ggcagctctggtagctccaatggaaagagaactcggtctgggggcaagtcctcccccaag
tcctcaaactccgatgacacagatgcccactcgagtgggaacgactcagccgagagagag
gtggaaggtcacatgggacgtgagacatcaacctgcagcagctcccataacgggaaggac
tctgccatggagacaacagagagcaaaagtgccaactcccacagcccttcccctcccaac
agctctatggtctacagcctgctgagtggcagctcggcgcaggaccacccgtccaccagc
ggatgcagcagtgaccagccagcctggctacagacccagagagagctgctcaaggctctg
aaggagctaaagatccgcatgcctgcagaccaccgggcgaaaggccgctccagcaccctg
gcctccctgcagtatgcactcaactgtgtcaaacaagtccgagcgaatcaggagtattat
caccagtggagtgtggaggagagccacggttgcagtctggacctctctgccttcaccaca
gaggaactggacaacatcacctctgaatacacactccagaacacggacacgttctcagtg
ggagtgtccttcctctctgggaagttggtgtacatctccccccaggcctctcccatgctg
cgcactaagcccaatcgactccaggggacactcttctctgagctgttggccccccaggac
gttagcactttctacagcagcactgctccctgccgcctgcctccctgggcctcctgtact
ggctccatgacctcccctgtggactgcacccaggagaaatccatgttctgccgtatcagt
agtgggagggacagtgagggggaagtgcggtactaccccttccgtatgaccccctaccag
ctaaccctacgggactccgacatgtcccaaccacagccctgctgcctgctcatcgctgag
aaggtgcactcaggatacgaagctccccgcatcccagcggacaagaggatttttaacact
agccacacccccggctgtctctttcaggaagtagatgaaagagctgtgccgttgctaggc
tacctgccccaggacctggttgggactcctgtcctcatgtacctccaccctgatgacagg
cctgtcatggtggccatacacaagaagattctccagtcagcagggcagccctttgaacac
tcgcccctgcgtatgtgtgctcggaacggggagtatctcaccatagataccagctggtcc
tccttcgtcaacccctggagccgcaaagttgccttcatcgtgggtcgacacaaagtcaga
acgagtcccctgaacgaagatgtgttcacccctagtatggaggtggaggtgcgggccatg
tctccagagatccccaggctcagtgagcagatccaccgtgtgctggtgcagcccgtccac
agtggtgcctcccagggctactgcagctcccacggatcccagtcacacaggcccagcccg
ggctcctcaggcagcagcagcccctccaccaaggggatcatccagatgaatatccagaga
ccacagcagatgacattccagcagatgtgtaaggacgtccacatggtgaagaccaatggt
cagcaggtcttcatcgagtcccgcaaccgcccaccgctccgcaaacacgccagcgctgga
gacctggtgatgccagagaatttaaacaaagacttgggacctattggagctctggggcca
actaaaaccctggcctccgtgcagtcaaggaaagatccgtcagccaactactcctaccag
cagatcaactgtctggacagcatcgtacgctacttggagagctgtaacatccccaacaca
gtgaagaggaaatgtggctcctcttcctgcaccacatcatcaacgtcagacgatgacaag
cagagggagttgtctggaacagctaaagatcttgaagggtcacagggtaaggaagggtct
aaaggggggccacagatgagccctctggcgctgcacggcaaggctgagagtgttgtctct
ctcacgtcccaatgtagcttcagcagcaccatcgtccatgtaggggacaagaagccccca
gagtcagatattatcatgatggaggagacacctcccaccaccaccgccccagccattaac
aacgccatcaccacggcagtgaccccccgtccctcgacctttcccagcccagcaacaccc
agccctgcccagcctgagagggatagccgcaggtcggctggatgctcaggcagcctgggt
ctgaccaaggaggtgctgtctgcccacaccctgcaggaggaacaggtgttcctgagccgg
ttcagggacctgggacagctccgcatgctggaccccggtcctcctctgagaggacacacc
accacacacaaaggagtgcacacctcgaaggactacccagcaggtggtaacggacggagg
aggggccggggggccaagaggctgaagcaccagcaggagggctcccagcacgggggctgc
cccaagacaggctcagggatgaacagaagttccagaaaggaagggcaggggaaccaaggc
cccatgttccccatgggtcaacccctaatgatgcagggacccctgacctcgtcctcttcc
tggcccacctctgtggccagcctccctcctgccgtgtcccagtaccctccaggagtccta
cccttcttccccctctaccccaacgtgcaacaacaactcctggcccacaccggggtgaac
cccaacgccatgcagttgggttaccccagcccccagccaggcttccagtaccccctgcat
gccaatcagatccccatgccaatggctcccccgatgatggttgttctgcccaactacatg
ttccctcaactcaatggaggtgtaccacagctcaaccagctcaatacagccatgcctcag
tataacacagccatgcctcaccttaaccccagtatccctggtatggcacaacttaaccag
gcactaccgcagttcaaccaggctatcccactaccacaactcaatcctgtcttggctcaa
ttcaaccctgctgtgacgcagatgaatggcatgcctctagctcaacacaacccgtcacac
gtcaatcctgctttgtcgatgatcccacaacattttcacaatcccaacccaacattacct
ttcccaaatcccattccggtgcccgggcttccttgctttgccttacccaggattgatccc
acttttgtcccacgtggcaactcccgctccagcacccctcagtccacatgccaatccccc
ctggaagggaccaactcgcccctcttccagtcacgatgctcctcccccctcaacctgctg
cagctggaggagttgccaggcaacaggcaggagggcatgtcaacaggggcgcagcagacc
ccacccccacctggctcgtcgtctcaggtcggaggtcaaggctctgttaaccgcaacagc
aacatgaagggtgatgccaaagagtacgataatgctgatgttgataaccaggacgccatg
tccacctccagtgacctgctggacctgctgctgcaagaggacgcctgctcaggcaccggc
tcggctgcctctggctccgggtcctctggctccgggtcctctggctctaatggatgcagc
acctcagggagtgacacaagaagcagcaacaccagcaagtactttggcagcattgactca
tcagagaacgaccataagcaggcagcaggcggggctgaagaggcccagctcatgaagtat
gtccttcaggaccctatctggctccttatggccaacacagatgacaaggttatgatgacc
taccaaatgcccaccagggacagggagactgttctaaggcaagatcgtatggtactgagg
gcggtgcagaaacagcagccacacttcactgaggagcagaagagagagctgatccaggtc
cacccctggatgggcaccggacgcctgccacaggccatcaacaaccctacttgtaccggg
tgcggttctcctacagctacctccgccccccggccctttgatgtggagctgcaggacatg
gatctgactggggtcctacagctacaggaagaggctaccgcacacacagagacacatgtt
acaatggcaacagacacttccatctctccacctcaagctccccagacagagactaagggg
ggtgaggctgagaggcaaggggagcaggaaggagactgtaaggacaccagagtgaaggag
ttggaggtaacatcctcatcatctgtaacagagaaaggggactctgtggctgtaaatggc
aactga

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