KEGG   Salvelinus namaycush (lake trout): 120021382
Entry
120021382         CDS       T07522                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120021382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:snh03041]
    120021382
Spliceosome [BR:snh03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120021382
 Complex B
    120021382
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 120021382
NCBI-ProteinID: XP_038821058
UniProt: A0A8U0TMH4
LinkDB
Position
26:complement(30197217..30208851)
AA seq 908 aa
MCSISMADKNGKKGKPVGVKRTLTKREQEDLKKKEEEKAAEVFEEFLACFDSNDKSGVKT
FVRGGIVNATKEEEAAEVKKSKLYRPITKFTSVSQNISPAHSSEIRRPIVKKKMEEKKKS
NLELFKEELKQIQEEREERYKRKTNEPGGGYGDLDIPLTRRSTFTCLATYERLPPVFDDD
PAIPNTTNLYIGCISPKMNEEMLCKEFGKYGPLASVKIMWPRSDEERTRVTNRGFVAFMT
RKDAERALAALDGKMVMGFEMKLGWGKAVRIPPQPLYTPIGVLKMSTPPPPSGLPFNAQP
RDRFRNDFTKPWGRSKEEFDKTLSEAVVKVVIPTERNLLGLIHRMIEFVVREGPMFEAII
MSKEKNNPDLRFLFDNKSQEHVYYRWKLYSILQGEPPSEWRTADFRMFRGGSIWRPPLLN
PYLHGDEEAGEEEESPSLEEELLKKGQLKTEHRERLEMLLRGLTPRREDIGDAMLFCLER
AEAAEEVVGSIAESLSLLQTPLQKKIARLYLVSDILYNSCAKVANASYYRKYFEAKLPQI
FGDISDAYRNIQARLQAEQFKQKIMGCFRAWEDWAVYPESYLIQLQNIFLGLIKAGEEVI
ERVEVSSPDLDGAPLDGAPLDGAPLDNLDGSPLAWDPASLDGVPVDDIDGVPLGAPMEDI
DGMPLDDLAHSRVALSKWERVDDADALPQANTESKWDTLGERDLGDDLNASANIKGGDGK
SEGDSSDDDSPSKYDNADFKSSLSSFEMSESKRSRLRELEVKVMKFQDELESGKKPRKSG
LNMQKQVAHYRNKLLQEEFDKDDKEKRERSIPKSKERSKKDERRDKAEETSKGRDKEKSK
RSQDRDRGRSRDTEERTHKYRGHSPAKIKSKSPKKSKRSRSPSPVRKTWRSSSRSPHRSH
KKTKKSKH
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgtgcagtatcagcatggcagacaaaaatggcaagaaagggaaacctgtaggtgtgaag
agaacattgaccaagagagaacaagaagatctgaagaaaaaggaagaagaaaaagcagcg
gaagtttttgaagagtttttagcatgttttgacagtaacgacaaaagtggagtgaagact
tttgtccgtgggggtatcgtcaatgcaactaaagaagaggaagcagcagaggttaaaaag
agcaagctttaccgaccaatcaccaagtttacttcagtgtcccagaacatctcaccggca
cactcttctgaaatcagaaggcctattgttaaaaagaagatggaagagaagaagaagagc
aaccttgaactttttaaagaggagctaaagcaaatacaggaggaacgtgaagaaaggtac
aaaagaaagacaaatgagcctggaggaggatatggagacttggacataccactaacgcga
cgatcaacttttacatgtttagctacatatgaacgtctccctccagtatttgatgatgac
ccagccataccgaacacaaccaacctgtacattggctgcattagccccaagatgaatgaa
gaaatgctttgcaaagagtttggcaagtatggtcccctggcgagtgtgaagatcatgtgg
ccccgtagtgacgaggaacgcacaagggtcacaaatagaggctttgtggccttcatgacc
aggaaagatgcagagagggccttggctgctctagacggtaaaatggttatgggttttgaa
atgaagctgggatgggggaaagctgttcgcatccctccccagccactctatacacccata
ggggtacttaaaatgtccacacccccacccccctccggcctgcccttcaacgctcagccc
agagaccgcttccgcaatgactttaccaagccatggggcaggtccaaggaggagtttgac
aagactctgtccgaagctgtagtcaaagtggttatcccaacagaaaggaatctgttaggc
ctcatccacaggatgatagagtttgtggtgcgtgagggacccatgtttgaagccatcatt
atgagcaaagagaagaacaatcctgacttgaggtttctctttgacaacaaaagccaagag
catgtgtactaccgctggaaactctactccattctccagggcgagccccccagtgagtgg
aggacggcagacttccggatgttccgtgggggctccatctggaggccgcccctcctcaac
ccctacctccatggagatgaggaggcgggagaggaagaggagtctccctccctggaggag
gagctgctgaaaaagggccagctgaagacagagcacagggagagactagagatgctgctg
agaggactcacccctcgtagggaggacattggtgatgctatgctgttctgtctggagaga
gccgaggcagcggaggaggtggtggggtccatcgcagagtccctgtccctccttcagaca
ccactgcagaaaaagattgccagactgtaccttgtatccgacatcttgtacaactcctgt
gccaaagttgccaatgcatcttattatcgcaaatattttgaagcaaaattgccccagata
tttggtgacattagtgatgcatatcgaaacatacaagcaagactacaagctgaacagttc
aagcaaaagataatgggctgtttcagggcctgggaagactgggccgtatacccagagtct
tacctgatccagctgcagaacatcttcctgggtctgatcaaggcaggagaggaggtgatc
gagagggtagaggtgtcgtctccagacctggatggagccccgttggacggggcgccgtta
gacggagctccactggacaacctcgacggctcacccctggcctgggaccctgcctccctg
gacggggtgcctgttgatgacatcgacggggttcccctgggtgcacccatggaggacatt
gacggaatgcctttggatgacctggcccactcaagagtggctctatctaaatgggagagg
gtggacgatgctgacgctctcccacaagctaacactgaatccaaatgggacactttggga
gagcgagacttgggggatgacctgaatgccagtgctaacattaagggaggagatgggaag
tccgagggtgacagcagcgatgatgacagcccctccaagtacgacaatgctgacttcaag
agctcccttagcagttttgagatgtccgaaagcaagaggagccggctgagagagctggag
gtgaaggtgatgaagttccaggatgagctggagtctgggaagaagcccaggaagtcaggg
ttaaacatgcagaaacaggtggcgcactacaggaacaagctgttgcaagaggagtttgat
aaggatgacaaggagaagagagagagatccattccgaaatcaaaagagcgatcaaagaag
gatgagcggagagacaaggcggaggagaccagtaaaggacgggacaaggagaagagtaaa
aggagtcaagaccgggacaggggacggagtagagacacagaggagcggacacacaaatac
agaggacattctcctgcaaaaatcaagtcaaagtctcccaagaagtccaagcggtcccgg
tcgccctcgccagtcaggaagacatggaggtctagctcccggtcgccacaccgctcccac
aaaaagactaagaagagcaaacactga

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