Salvelinus namaycush (lake trout): 120021383
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Entry
120021383 CDS
T07522
Name
(RefSeq) WD repeat-containing protein 44-like isoform X1
KO
K20241
WD repeat-containing protein 44
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120021383
Membrane trafficking [BR:
snh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120021383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_Nup120_160
DUF4727
Motif
Other DBs
NCBI-GeneID:
120021383
NCBI-ProteinID:
XP_038821061
UniProt:
A0A8U0PAU3
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Position
Sna26:30175980..30197073
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AA seq
906 aa
AA seq
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MASDSDTEEFYDAAEDVHFTPPPKLTPTQFVLPTPQGVVESSPEDVAVGLATLEARQDDP
IQIIDSIIEESQKGIVAEEALLVGERDVETRAESQVKKENKAPVEPEHPAVEPQPVVERS
KQPQEQQGACSMVLPDIPGPSVGSQEHVQPPDITSTLGQGQSQPDLPPDLPDLPRVSAED
REQRPADILDQVCEGDKKPGDSTDPGPSKPPRQFTVEPDIVASTKKPPPSRPPPPSGAPP
PRPPPPSRPALPLSKKSQECMRPTGLDAEPEEPCGLVSPSSTVRGITKDLQHSLDLASAT
SGDKVVTAQENEDEQASGPIDDSLGPQRPRSNSGRELTDEEILASVMIKNLDTGEEIPLI
QAEEKLPTGINPLTLHIMRRTKEYITNDAAQSDDDDRGQAPLTDTDGGKLKQKTTRLKKF
LGKSVKRAKHLAEEYGEKAVNKVKSVRDEVFHNDQDDPSSSDDEGMPYTRPVKFKAAHSF
KGPFDFDQVKVVQDLSGEHMGAVWTMKFSHCGRLLATAGQDNVVRIWVLKNSFDYFNNMR
AKYNTEGRVSPSPSQESLCSSKSDTDGGVSKMSSVPEDPEDKNLPFRQVPFCKYKGHTAD
LLDLSWSKNYFLLSSSMDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLD
GKLRLWNIPDKKVALWNEVDGQTRLITAANFCQNGKYAVIGTYDGRCIFYDTERLKYHTQ
IHVRSTRGRNRVGRKITGIEPLPGENKILVTSNDCRIRLYDLRDLSLSMKYKGYVNSSSQ
IKASFSHDYSFIVSGSEDKYVYIWSTYHDLSKFTSVRRDRNDFWEGIKAHNAVVTSAIFA
PHPNLIVPQEAGAEKAGAGADAECKSVDSTDSETIPSGALKADHTEVLLSADFTGAIKVF
INVKKY
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagatagtgatacagaggaattctacgatgctgctgaagacgtacattttact
ccaccgcctaaattgacaccgacacagtttgttcttcccacacctcagggggtggtagag
agttcaccagaggacgtggctgttgggctggccacacttgaggcacgccaagatgacccc
atccagatcatcgacagcatcattgaggagagccagaagggaattgtggcggaggaggct
ctgctggtgggagagagggatgttgagacaagggcggagtcacaggtgaagaaggagaat
aaggcccctgtagaaccagagcatcctgctgtggaacctcagcctgtggttgagagatca
aagcagcctcaggaacagcagggagcgtgttccatggttctcccagacatccccggcccg
tcggttgggtcacaggagcacgtccagcccccagacatcaccagcaccctgggtcagggc
cagagtcaaccagacctcccgccggacctccctgacctaccccgggtgtctgcagaggac
agggagcagagacctgcagacatcctagaccaggtctgtgagggggacaagaagccaggt
gactccaccgaccctgggccttctaaacccccacggcagttcactgtagagcccgacatt
gtagccagcaccaagaagcctccgccctcacgcccccctcctcccagcggagctcctcct
ccacgaccacctcccccatcccgacctgctctacccctcagcaagaagtcccaggagtgt
atgaggcccacaggactggatgcggagccagaggagccgtgtggcctggtgtctcccagc
agcacagtgagaggcatcaccaaggatctgcagcactctctggacttggccagcgccacc
agcggggacaaggtggtcacagcacaggagaatgaggatgagcaggcatccggtcccatt
gatgactctctaggtcctcagcgcccacgctccaactctggcagagagctgactgatgag
gagatcctggcgagtgtgatgatcaagaatctggacactggggaggagatccctctgatc
caggcagaggagaagcttcctacagggatcaacccactcacattacacatcatgaggagg
accaaggagtacatcacgaatgacgccgcacagtccgatgatgatgacagaggccaggct
ccgctgactgacacagacggagggaagctgaaacagaaaaccactcggctgaagaagttc
ctgggcaagtctgtgaagagggccaagcatctggctgaggagtatggggagaaggccgtc
aacaaggtgaagagtgtccgtgatgaagttttccataacgaccaggatgacccgtcgtcc
agtgacgatgaggggatgccctacacccggcctgtcaagttcaaggcagcccacagcttc
aagggccccttcgactttgatcaggttaaggtggtccaggacctgagcggagagcacatg
ggtgcagtgtggaccatgaagttctctcactgcgggaggctgttggcgacagcaggccag
gacaacgtggtgcgaatctgggttctgaaaaattcctttgactacttcaacaacatgagg
gcaaagtacaacactgaaggtcgtgtgtctccctctccctctcaggaaagcctgtgttcc
tccaaatcagacacggacggtggggtgagtaagatgagcagtgttcctgaagaccctgag
gacaagaatctccccttccgccaagtcccgttctgcaagtacaagggtcatacagctgac
ctgcttgacctgtcctggtcaaagaactacttcctgctttcctcgtcgatggataagacc
gtccgactgtggcacatatccaggagagagtgtctatgctgctttcagcatattgacttt
gtcacagccatcgctttccatcccagagatgacaggtactttctgagtggctctctggat
gggaaactgcgtctgtggaacatcccagacaagaaggtggctctgtggaacgaggtggat
ggacaaacacgcctcatcactgctgccaacttctgccagaacgggaagtacgctgtcatt
ggcacctacgatggccgctgcatcttctacgacacagagcgccttaaataccacacccag
atccatgtacggtcaaccagaggcaggaaccgagtgggacggaaaatcacaggcatcgag
cctctgcctggagagaacaagattctggtaacctccaatgactgcaggatccgcctgtat
gacctaagggacctgtctctgtccatgaagtacaagggttatgtcaacagcagtagtcag
atcaaagccagcttcagccatgactattcgttcattgtgagtggctcagaagacaagtac
gtgtacatctggagcacctaccatgatctgagcaagtttacctccgtacgacgagaccgc
aatgacttctgggagggaattaaagcccacaatgcagtagtgacatcggccattttcgcc
ccccatcctaacctgatcgtcccccaggaggcgggggcagagaaagcgggggctggggcc
gatgcggagtgtaagagcgtggactccactgattccgagaccattccctcaggggctctg
aaggccgatcatacagaggttctgctctctgctgacttcaccggcgccattaaagttttc
atcaatgtaaaaaaatactga
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