Salvelinus namaycush (lake trout): 120021412
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Entry
120021412 CDS
T07522
Symbol
dnai1.2
Name
(RefSeq) dynein, axonemal, intermediate chain 1, paralog 2
KO
K10409
dynein axonemal intermediate chain 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120021412 (dnai1.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120021412 (dnai1.2)
04812 Cytoskeleton proteins [BR:
snh04812
]
120021412 (dnai1.2)
Cilium and associated proteins [BR:
snh03037
]
Motile cilia and associated proteins
Dynein arm
120021412 (dnai1.2)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120021412 (dnai1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
EIF3I
Beta-prop_HPS5
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
120021412
NCBI-ProteinID:
XP_038821102
UniProt:
A0A8U0PA36
LinkDB
All DBs
Position
Sna2:36507068..36538917
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AA seq
647 aa
AA seq
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MPVAHKTGAVKSKQDEEDGTETGEGDEWMQGKTLIKPLDQLDLTEAELKEEFTRILTANN
PHAPQNIVRYSFKERSYKPISSVDQLAVHFVLEGNLLHQDSDEARRQRAKQGDVEEGGGE
ERADSVESKAGKKEQKITNQFNFSERASQTLNNPLRERGCQTEPPPRANFSATANQWEIY
DVYLEVLQKQEKNKEKAKAVPKKDDDKGKKKMMLVETQSDDITKVAKVAKIIERMVNQNT
FDDIAQDFKYFEDASDEYREQEGTLLPLWKFQYDKAKRLSVTALCWNESYKDLFAVGLGS
YDFTKQGRGMLVFYSLKNSTFPEYIYPTTSGILCLDIHKHLPYLVAVGFYDGCVAVYNLK
EETLQPIYKSTAKSGKHTDPVWQVKWQKDDMDNNHNFFSVSSDGRVVSWTLVKNELVFTD
IIKLSLAGAVSEGPEGVQLPIMACGTSFDFHKQIDYLFLVGTEEGKIHKCSKAYSSQFLE
TYNAHNMAVDAVKWNHFHTKVFISCSSDWTVKIWDHTIKTPMFTFDLNASVGDVAWSPYS
STVFAAVTTDGKVHTFDLSINKYEAICQQPVVAKKKTKLTHIEFNPVYPIIIVGDDRGYV
TSLKLSPNLRKKPKEKKGQELPKGPEVEIAKMEKLLSLLREPENSNA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagctcacaagacaggagctgtgaaatccaagcaggatgaggaggatggaaca
gaaacgggtgaaggagatgagtggatgcaagggaagactctgatcaagccacttgaccag
ctggatctcaccgaggctgagttaaaagaggaattcaccaggatcctgactgcaaacaac
ccacatgcccctcagaatatcgtccgatacagcttcaaggaacgttcatacaagccaatc
agcagtgtggatcagctggctgtccactttgtgctggagggtaacctgttgcaccaggac
tcagatgaggcacgcagacagagggccaaacagggggatgtggaggagggcgggggagag
gagagagctgacagcgtggagtccaaggctggcaagaaggagcagaaaatcaccaaccag
ttcaacttcagtgagagggcctcccaaaccctcaacaacccactcagggaaaggggatgt
cagacagagccccctcctcgtgcaaacttctcagctactgccaatcagtgggagatctat
gacgtgtatttggaggtgctgcagaagcaggagaagaacaaggagaaggcgaaagccgtc
cccaagaaggacgacgacaaaggcaagaagaagatgatgctggtggagactcagagtgat
gacatcaccaaagtggccaaggtggccaagatcatcgagcggatggtgaaccaaaacacg
tttgacgacattgcacaagattttaagtactttgaagatgcctctgatgagtaccgggag
caggagggcacccttctccccctctggaagtttcagtatgacaaagccaagaggctgtct
gtcactgccctctgctggaatgaaagctacaaagatttgtttgccgtcggccttggatca
tacgacttcaccaagcaggggcggggcatgctggtgttctactccctgaagaactccact
ttccctgagtatatctaccccacgacgtcgggcatcctgtgcctggacatccacaagcac
ctgccctacctggtggccgtgggcttctacgacggctgcgtggccgtctacaacctcaaa
gaagagacgctgcagcccatctataagagcaccgccaagtctggcaagcacaccgacccc
gtgtggcaggtgaagtggcagaaggacgacatggacaacaatcacaacttcttctctgtg
tcatctgatggccgtgtggtgtcatggactcttgtcaagaatgagctggtcttcacagac
atcatcaagctgtcgttggcgggagctgtgtcagaaggaccagaaggcgtgcaacttccc
atcatggcttgtggaacatccttcgacttccacaaacagattgactacctcttcctggtt
ggcacggaggagggcaagattcacaagtgctccaaggcttactccagccaattcctggag
acctacaatgcccataacatggcagtggacgcagttaagtggaaccacttccacaccaag
gtctttatatcctgcagctctgattggaccgtcaagatctgggaccacaccatcaagacc
ccaatgttcacctttgacctgaacgcctctgtgggagatgtggcatggtctccttactcc
tccactgtcttcgctgcagtcaccactgatggcaaggttcatacctttgaccttagcatc
aacaaatatgaggccatctgccagcagccggtggtggccaagaaaaagactaagctgact
cacattgagtttaaccccgtctaccccatcatcatcgtgggagacgaccgaggatatgtc
accagcctcaagctctcgcctaacctgcgcaaaaaacccaaggagaagaagggtcaggag
ctgcccaaggggcctgaggtggagatcgccaagatggagaagctgctgagtttactgcgg
gagccagagaacagcaatgcttag
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